CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98621	Soybean	nucleus	69.13	90.75
KRH73851	Soybean	cytoskeleton, cytosol, nucleus	87.92	87.04
KRH14295	Soybean	cytosol	86.91	86.05
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	33.89	77.69
VIT_19s0090g01530.t01	Wine grape	cytosol	76.85	76.85
PGSC0003DMT400033425	Potato	mitochondrion	73.49	74.74
GSMUA_Achr3P11020_001	Banana	cytosol	70.81	70.1
EER96962	Sorghum	cytosol	66.44	67.35
Zm00001d020915_P002	Maize	cytosol	66.44	66.89
TraesCS5D01G270300.1	Wheat	cytosol	67.11	66.01
HORVU5Hr1G072760.2	Barley	mitochondrion	67.11	66.01
Os09t0484800-01	Rice	cytosol, mitochondrion	65.44	65.66
TraesCS5B01G261100.1	Wheat	mitochondrion	66.78	65.25
Solyc12g014590.1.1	Tomato	mitochondrion	71.48	65.14
GSMUA_Achr3P02460_001	Banana	cytosol	64.09	64.75
TraesCS5A01G262700.1	Wheat	mitochondrion	67.79	64.33
CDY22806	Canola	cytosol	66.44	63.67
GSMUA_Achr10P...	Banana	cytosol	63.42	63.42
Bra018859.1-P	Field mustard	cytosol	66.11	63.34
CDY37125	Canola	cytosol	66.11	63.34
TraesCS5D01G533400.1	Wheat	cytosol	62.42	63.27
AT1G50590.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	65.77	63.23
TraesCS4A01G336100.1	Wheat	nucleus	62.08	62.93
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	61.41	62.89
TraesCS5B01G535900.1	Wheat	plastid	61.74	62.59
GSMUA_Achr9P01680_001	Banana	cytosol	61.74	61.95
TraesCS5D01G533500.1	Wheat	plastid	61.41	60.8
KRH46866	Soybean	plastid	62.42	57.23
PGSC0003DMT400057126	Potato	cytosol, mitochondrion, nucleus, plastid	56.38	56.38
Solyc07g065160.2.1	Tomato	mitochondrion	56.38	56.38
KRH01821	Soybean	plastid	61.07	56.17
TraesCS4A01G335900.1	Wheat	plastid	54.36	55.1
HORVU5Hr1G120790.2	Barley	cytosol	60.74	55.02
Zm00001d008595_P001	Maize	plastid	58.72	52.87
Os03t0845000-01	Rice	plasma membrane	63.76	52.63
OQU90634	Sorghum	mitochondrion	62.08	51.82
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	17.11	51.52
TraesCS4A01G336000.2	Wheat	nucleus	56.71	51.06
TraesCS4A01G336200.2	Wheat	plastid	62.08	50.0
TraesCS5B01G536000.2	Wheat	plastid	61.74	49.73
TraesCS5B01G535700.3	Wheat	plastid	61.07	49.32
TraesCS5B01G535800.1	Wheat	plastid	60.74	48.66
TraesCS5D01G533100.1	Wheat	plastid	60.07	47.48
Zm00001d034829_P001	Maize	mitochondrion	59.4	46.7
HORVU5Hr1G120780.3	Barley	plastid	60.07	46.61
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	29.53	43.78
Os08t0364900-00	Rice	plastid	50.67	42.9
TraesCS1B01G420000.1	Wheat	plastid	51.34	42.5
HORVU5Hr1G120800.4	Barley	plastid	62.75	42.12
TraesCS1D01G400000.1	Wheat	plastid	50.34	41.67
TraesCS1A01G391900.1	Wheat	plastid	50.34	41.44
HORVU5Hr1G120810.1	Barley	plastid	32.89	39.36
Zm00001d032363_P001	Maize	cytosol	46.31	36.8
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	48.99	36.68
EES14882	Sorghum	cytosol, plastid	45.97	36.24

Protein Annotations

EMBL:ACUP02005337	EnsemblPlants:KRH46283	EnsemblPlantsGene:GLYMA_08G324700	EntrezGene:100802484	Gene3D:2.60.120.10	InterPro:IPR014710
InterPro:Pirin	InterPro:Pirin_C_dom	InterPro:Pirin_N_dom	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903
PANTHER:PTHR13903:SF5	PFAM:PF02678	PFAM:PF05726	PIRSF:PIRSF006232	ProteinID:KRH46283	ProteinID:KRH46283.1
SUPFAM:SSF51182	UniParc:UPI0002338CBB	UniProt:I1KYF4	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr8:+:44284572..44288319

Molecular Weight (calculated)

33187.7 Da

IEP (calculated)

5.379

GRAVY (calculated)

-0.264

Length

298 amino acids

Sequence
(BLAST)

001: MPQRKGCSSL NEPRLVARKF LARPQIEGVG TVVRRSIGGF ELKYFDPFIV LDEFSVTAPA GFPDHPHRGF ETVTYMLQGA IMHEDFEGHK GTIEAGDLQW
101: MTAGRGIVHS EMPAAQGTQK GLQLWINLAS KYKMIEPRYQ EVLSKDIAEA EDDGIKVRVI AGEALGIKSP IYTRTPTMFL DFSLKPGGHL QQPIPNSWNA
201: FVYILEGEGI FGNMISQPSN SHHILLLGPG DGLEAWNKSS KLLRFILVGA EPLGEPLVQF GPFVMNSQEE IDQTIDDFEN FANGFEKARH WTSESQIN

Best Arabidopsis Sequence Match ( AT1G50590.1 )
(BLAST)

001: MPISEKSSAT NTRLVVKKLF ARQLHEGFGA VVRRSIGRFE FRYFDPFLVL DEFSVSAPAG FPDHPHRGFE TVTYMLEGEI LHEDCEGHKG VIREGGLQWM
101: TAGKGIVHSE MPSSNSNGIT HNKGLQLWIN LSSRQKLVEP SYQEIESKDI AETEKDGVRV RVIAGEWNGV KSKICTRTPT MYLDFTLSPG SRISQPIPLH
201: WNAFVYVLQG HGHFGDSKLQ HSAAAAHHLL VLGLGGDMLE AWNGSDSGLP LRFILVAGEP IGEPMVQFGP FVMNTQEEID ETIDDFENFR NGFEKARHWK
301: SQAASALGLF

Arabidopsis Description

Pirin-like protein At1g50590 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.