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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS3A01G457000.1
TraesCS3D01G450000.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G59220.1 TraesCS3A01G457000.1 AT1G09030.1 17322342
AT3G59220.1 TraesCS3D01G450000.1 AT1G09030.1 17322342
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G533400.1 Wheat cytosol 88.66 87.76
TraesCS5D01G533500.1 Wheat plastid 89.69 86.71
HORVU5Hr1G120790.2 Barley cytosol 90.03 79.64
TraesCS4A01G336000.2 Wheat nucleus 84.88 74.62
VIT_05s0094g00610.t01 Wine grape cytosol 27.49 74.07
TraesCS5B01G535700.3 Wheat plastid 93.81 73.98
Solyc09g098160.2.1 Tomato mitochondrion 70.79 70.79
PGSC0003DMT400031088 Potato cytosol 71.48 70.27
VIT_05s0062g01190.t01 Wine grape cytosol, nucleus, peroxisome 70.79 70.07
GSMUA_Achr9P01680_001 Banana cytosol 71.48 70.03
TraesCS5D01G533100.1 Wheat plastid 90.38 69.76
GSMUA_Achr3P02460_001 Banana cytosol 70.45 69.49
GSMUA_Achr10P... Banana cytosol 70.79 69.13
PGSC0003DMT400031070 Potato mitochondrion 68.04 68.75
Zm00001d008595_P001 Maize plastid 76.98 67.67
HORVU5Hr1G120780.3 Barley plastid 88.66 67.19
Os03t0845000-01 Rice plasma membrane 82.47 66.48
OQU90634 Sorghum mitochondrion 79.04 64.43
VIT_09s0096g00130.t01 Wine grape cytosol, nucleus, plastid 21.99 64.0
VIT_19s0090g01530.t01 Wine grape cytosol 64.95 63.42
Solyc09g098180.2.1 Tomato plastid 71.82 63.33
KRH01821 Soybean plastid 68.38 61.42
KRH46283 Soybean mitochondrion 62.89 61.41
KRH14295 Soybean cytosol 63.23 61.13
KRH46866 Soybean plastid 68.04 60.92
CDY55513 Canola plastid 61.86 60.81
Bra004746.1-P Field mustard plastid 61.86 60.81
KRH73851 Soybean cytoskeleton, cytosol, nucleus 62.89 60.8
PGSC0003DMT400033425 Potato mitochondrion 61.17 60.75
Bra000289.1-P Field mustard cytosol 61.51 60.68
Zm00001d009514_P001 Maize cytosol, endoplasmic reticulum 20.62 60.61
Zm00001d034829_P001 Maize mitochondrion 77.66 59.63
TraesCS5D01G270300.1 Wheat cytosol 61.86 59.41
CDY17721 Canola mitochondrion 39.86 59.18
KRG98621 Soybean nucleus 45.7 58.59
AT3G59220.1 Thale cress cytosol 56.7 57.49
CDX83501 Canola mitochondrion 62.54 56.88
CDY17946 Canola mitochondrion 61.86 56.6
CDY42802 Canola mitochondrion 61.86 56.07
CDY22806 Canola cytosol 59.45 55.63
CDY37125 Canola cytosol 59.11 55.31
AT1G50590.1 Thale cress cytosol, mitochondrion, nucleus, plastid 58.76 55.16
Bra018859.1-P Field mustard cytosol 58.76 54.98
AT3G59260.1 Thale cress cytosol 50.86 54.61
Solyc12g014590.1.1 Tomato mitochondrion 60.14 53.52
CDX67787 Canola nucleus 49.14 52.77
CDX98356 Canola cytosol 47.42 52.27
CDX89016 Canola nucleus 51.55 51.72
CDY06015 Canola cytosol 50.17 51.41
CDY57498 Canola cytosol 48.8 51.08
Bra014547.1-P Field mustard nucleus 50.86 51.03
CDY06016 Canola cytosol 46.39 50.56
CDY00611 Canola nucleus 50.17 50.52
CDY57499 Canola cytoskeleton, cytosol, nucleus 52.23 49.19
AT2G43120.2 Thale cress nucleus 62.54 48.92
Zm00001d046171_P001 Maize endoplasmic reticulum, mitochondrion, nucleus, plastid 33.68 48.76
Bra007437.1-P Field mustard cytosol 32.65 48.47
Solyc07g065160.2.1 Tomato mitochondrion 48.8 47.65
PGSC0003DMT400057126 Potato cytosol, mitochondrion, nucleus, plastid 48.8 47.65
Bra003367.1-P Field mustard cytosol 30.24 46.07
TraesCS1D01G400000.1 Wheat plastid 56.01 45.28
Bra007438.1-P Field mustard cytosol 28.18 44.32
VIT_09s0096g00380.t01 Wine grape nucleus 13.4 27.86
Protein Annotations
EnsemblPlants:TraesCS5D01G533200.1EnsemblPlantsGene:TraesCS5D01G533200Gene3D:2.60.120.10InterPro:IPR014710InterPro:PirinInterPro:Pirin_C_dom
InterPro:Pirin_N_domInterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfPANTHER:PTHR13903PANTHER:PTHR13903:SF5PFAM:PF02678
PFAM:PF05726PIRSF:PIRSF006232SUPFAM:SSF51182MapMan:35.1::
Description
No Description!
Coordinates
chr5D:-:547882801..547884115
Molecular Weight (calculated)
32004.1 Da
IEP (calculated)
8.911
GRAVY (calculated)
-0.349
Length
291 amino acids
Sequence
(BLAST)
001: MSSSSSFENP RKVVKKVMSL SQAEGDGATV RRSIGGHELR NLDPFLLLDE FSVSKPGGFP DHPHRGFETV TYMLHGAFTH QDFTGHKGTI RTGDVQWMTA
101: GRGIVHSEMP ASNGVQKGLQ LWINLASKDK MIEPRYQELK SKDISQAEKH GVKVRIIAGE AFGVRSPVYA RTPTMYMAFT MQPGSQLHQP IPEGWNAFVY
201: IIEGEGVFGR EGVAPASAHH CLVLGAGDGL SVWNRSGAQL RFVLAAGQPL NEPVVQQGLF VMNSRAQIQQ AMQDYYYGHN GFEKASQWSS A
Best Arabidopsis Sequence Match ( AT3G59260.1 )
(BLAST)
001: MKVMVLSLGK ASPSKSDHEL LDPFVSLVEF SVSPPGGFKD HPHRGFESVT YMFQGGIIHQ DCNGNKGTIH EGDVQWMTAG RGIIHSEMPE EQVNKGLQLW
101: INLPSSAKMI EPKNIEISSS EIPSADDYGV EVKVIAGESM GVKSPFYTKT PIMFLDFTLD PKAQTHQAVP ESWTAFAYIV EGDEGVFSSS DSSTVQAHNV
201: VVFGTGDEVS VWNTSNSRPL RFLLIAGEPI GEPVVQHGPF VMNSQDEIEM TIGDYRNGMN GFEMAKHWRS E
Arabidopsis Description
Putative pirin-like protein At3g59260 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX45]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.