Factsheet for Bra004746.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55513	Canola	plastid	98.65	98.65
Bra000289.1-P	Field mustard	cytosol	94.93	95.25
AT2G43120.2	Thale cress	nucleus	92.57	73.66
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	72.3	72.79
VIT_05s0094g00610.t01	Wine grape	cytosol	26.35	72.22
PGSC0003DMT400031088	Potato	cytosol	69.26	69.26
KRH01821	Soybean	plastid	72.64	66.36
PGSC0003DMT400031070	Potato	mitochondrion	64.19	65.97
KRH46866	Soybean	plastid	72.3	65.85
Solyc09g098160.2.1	Tomato	mitochondrion	64.53	65.64
Bra014547.1-P	Field mustard	nucleus	64.19	65.52
GSMUA_Achr10P...	Banana	cytosol	65.54	65.1
GSMUA_Achr9P01680_001	Banana	cytosol	65.2	64.98
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	28.38	64.62
Bra007437.1-P	Field mustard	cytosol	42.57	64.29
GSMUA_Achr3P02460_001	Banana	cytosol	63.51	63.73
TraesCS5B01G535900.1	Wheat	plastid	63.18	63.61
Bra003367.1-P	Field mustard	cytosol	40.88	63.35
GSMUA_Achr3P11020_001	Banana	cytosol	64.19	63.12
TraesCS4A01G336100.1	Wheat	nucleus	61.49	61.9
TraesCS5D01G533400.1	Wheat	cytosol	61.49	61.9
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	60.81	61.86
Solyc09g098180.2.1	Tomato	plastid	68.24	61.21
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	20.61	61.0
Os09t0484800-01	Rice	cytosol, mitochondrion	61.15	60.94
EER96962	Sorghum	cytosol	60.47	60.88
Bra007438.1-P	Field mustard	cytosol	37.84	60.54
TraesCS5D01G533500.1	Wheat	plastid	60.81	59.8
TraesCS5B01G261100.1	Wheat	mitochondrion	61.15	59.34
Zm00001d020915_P002	Maize	cytosol	58.78	58.78
TraesCS5D01G270300.1	Wheat	cytosol	60.14	58.75
HORVU5Hr1G072760.2	Barley	mitochondrion	59.8	58.42
TraesCS5A01G262700.1	Wheat	mitochondrion	60.47	57.01
HORVU5Hr1G120790.2	Barley	cytosol	62.5	56.23
Zm00001d008595_P001	Maize	plastid	61.82	55.29
TraesCS4A01G335900.1	Wheat	plastid	54.05	54.42
Bra018859.1-P	Field mustard	cytosol	56.76	54.02
OQU90634	Sorghum	mitochondrion	63.51	52.66
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	17.57	52.53
Os03t0845000-01	Rice	plasma membrane	63.18	51.8
TraesCS4A01G336000.2	Wheat	nucleus	54.73	48.94
TraesCS4A01G336200.2	Wheat	plastid	61.15	48.92
TraesCS5B01G536000.2	Wheat	plastid	61.15	48.92
Zm00001d034829_P001	Maize	mitochondrion	62.16	48.55
TraesCS5D01G533100.1	Wheat	plastid	61.49	48.28
TraesCS5B01G535700.3	Wheat	plastid	60.14	48.24
TraesCS5B01G535800.1	Wheat	plastid	60.47	48.12
HORVU5Hr1G120780.3	Barley	plastid	62.16	47.92
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	29.73	43.78
Os08t0364900-00	Rice	plastid	52.03	43.75
TraesCS1B01G420000.1	Wheat	plastid	52.36	43.06
TraesCS1A01G391900.1	Wheat	plastid	51.69	42.27
TraesCS1D01G400000.1	Wheat	plastid	51.01	41.94
HORVU5Hr1G120800.4	Barley	plastid	61.49	40.99
EES14882	Sorghum	cytosol, plastid	47.97	37.57
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	50.34	37.44
Zm00001d032363_P001	Maize	cytosol	47.3	37.33
HORVU5Hr1G120810.1	Barley	plastid	30.07	35.74
VIT_09s0096g00380.t01	Wine grape	nucleus	13.18	27.86

Protein Annotations

EnsemblPlants:Bra004746.1	EnsemblPlants:Bra004746.1-P	EnsemblPlantsGene:Bra004746	Gene3D:2.60.120.10	InterPro:IPR014710	InterPro:Pirin
InterPro:Pirin_C_dom	InterPro:Pirin_N_dom	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903	PANTHER:PTHR13903:SF5
PFAM:PF02678	PFAM:PF05726	PIRSF:PIRSF006232	SEG:seg	SUPFAM:SSF51182	UniParc:UPI0002547A83
UniProt:M4CKL1	MapMan:35.1	:	:	:	:

Description

AT2G43120 (E=9e-157) | pirin, putative

Coordinates

chrA05:+:1627343..1628922

Molecular Weight (calculated)

32766.7 Da

IEP (calculated)

5.614

GRAVY (calculated)

-0.385

Length

296 amino acids

Sequence
(BLAST)

001: MSSSSSQNFV SRSVIKKVFA KLQKEGDGAV VRRGISRSEQ KLLDPFLMLD EFSVSPPAGF PDHPHRGFET VTYVLEGGIT HQDFKGHKGT IYAGDVQWMT
101: AGRGIIHSEM PEEEINKGLQ LWINLSSNEK MIEPNYQELS SSDIPKAEQN GVQVKVIAGE SMGIKSPVYT RTPTMFLDFT LDPGAQFHQK VPESWNAFAY
201: VLESGEGGAV FGSSNASPVS SHNVVVFEQG NDGVSVWNKS SSKKLRFVLI AGEPLGEPVV QYGPFVMNTQ AEIDMTIEDY HYGKNGFEMA KYWRSQ

Best Arabidopsis Sequence Match ( AT2G43120.2 )
(BLAST)

001: MAHNQFKDSL DPLSSINRHT ESQHQNTSKI RLLPRKATKK KKREEKTTLK YMRAAINRAN SLGGLFSFRF IRNIKSMSSS TSQDFVSRPV IKKVFAKLQK
101: EGDGAVVRRG ISRSEQKLLD PFLMLDEFSV SPPAGFPDHP HRGFETVTYV LEGGITHQDF KGHKGTIYAG DVQWMTAGRG IIHSEMPEEE VNKGLQLWIN
201: LSSNEKMIEP NYQELSHSDI PKAEQNGVEV KVIAGESMGI QSPVYTRTPT MFLDFTLQPG AQIHQNVPES WNAFAYILES GEGGGVFSSS NSSPIPAHSV
301: VVFGPGNDGV SVWNKSSSKQ LRFVLIAGEP IGEPVVQYGP FVMNTQAEID MTIEDYHYGK NGFEMAKYWR SQ

Arabidopsis Description

RmlC-like cupins superfamily protein [Source:TAIR;Acc:AT2G43120]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.