Factsheet for HORVU5Hr1G120790.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G098490.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59220.1	HORVU3Hr1G098490.1	AT1G09030.1	17322342

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	79.64	90.03
TraesCS4A01G335900.1	Wheat	plastid	73.86	82.65
TraesCS4A01G336000.2	Wheat	nucleus	73.86	73.41
VIT_05s0094g00610.t01	Wine grape	cytosol	24.01	73.15
TraesCS5B01G535800.1	Wheat	plastid	80.85	71.51
TraesCS5D01G533100.1	Wheat	plastid	81.76	71.35
HORVU5Hr1G120780.3	Barley	plastid	82.98	71.09
GSMUA_Achr3P02460_001	Banana	cytosol	63.53	70.85
TraesCS5B01G535700.3	Wheat	plastid	79.33	70.73
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	62.92	70.41
Solyc09g098160.2.1	Tomato	mitochondrion	62.01	70.1
PGSC0003DMT400031088	Potato	cytosol	62.92	69.93
GSMUA_Achr10P...	Banana	cytosol	63.22	69.8
GSMUA_Achr9P01680_001	Banana	cytosol	62.92	69.7
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	27.36	69.23
Zm00001d008595_P001	Maize	plastid	69.6	69.18
PGSC0003DMT400031070	Potato	mitochondrion	60.49	69.1
Os03t0845000-01	Rice	plasma membrane	73.86	67.31
OQU90634	Sorghum	mitochondrion	70.82	65.27
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	19.76	65.0
VIT_19s0090g01530.t01	Wine grape	cytosol	58.66	64.77
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	19.15	63.64
Solyc09g098180.2.1	Tomato	plastid	63.53	63.33
KRH01821	Soybean	plastid	61.7	62.65
Bra004746.1-P	Field mustard	plastid	56.23	62.5
CDY55513	Canola	plastid	56.23	62.5
Bra000289.1-P	Field mustard	cytosol	55.62	62.03
KRH46866	Soybean	plastid	61.09	61.85
PGSC0003DMT400033425	Potato	mitochondrion	55.02	61.77
Zm00001d034829_P001	Maize	mitochondrion	71.12	61.74
HORVU5Hr1G120800.4	Barley	plastid	82.37	61.04
KRH73851	Soybean	cytoskeleton, cytosol, nucleus	55.62	60.8
KRH46283	Soybean	mitochondrion	55.02	60.74
CDY17721	Canola	mitochondrion	36.17	60.71
KRH14295	Soybean	cytosol	55.32	60.47
HORVU5Hr1G072760.2	Barley	mitochondrion	54.41	59.08
CDY17946	Canola	mitochondrion	56.84	58.8
CDX83501	Canola	mitochondrion	57.14	58.75
KRG98621	Soybean	nucleus	40.12	58.15
AT3G59220.1	Thale cress	cytosol	50.46	57.84
CDY42802	Canola	mitochondrion	56.23	57.63
AT1G50590.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	52.58	55.81
CDY22806	Canola	cytosol	52.58	55.63
AT3G59260.1	Thale cress	cytosol	45.59	55.35
CDY37125	Canola	cytosol	52.28	55.31
Bra018859.1-P	Field mustard	cytosol	51.98	54.98
Solyc12g014590.1.1	Tomato	mitochondrion	54.1	54.43
CDX67787	Canola	nucleus	44.68	54.24
CDX98356	Canola	cytosol	42.86	53.41
CDY06015	Canola	cytosol	45.59	52.82
CDX89016	Canola	nucleus	46.5	52.76
CDY57498	Canola	cytosol	44.38	52.52
CDY00611	Canola	nucleus	45.9	52.25
Bra014547.1-P	Field mustard	nucleus	45.9	52.07
CDY06016	Canola	cytosol	41.95	51.69
HORVU5Hr1G120810.1	Barley	plastid	38.6	51.0
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	30.7	50.25
CDY57499	Canola	cytoskeleton, cytosol, nucleus	47.11	50.16
AT2G43120.2	Thale cress	nucleus	56.23	49.73
Bra007437.1-P	Field mustard	cytosol	29.48	49.49
Solyc07g065160.2.1	Tomato	mitochondrion	43.16	47.65
Bra003367.1-P	Field mustard	cytosol	27.36	47.12
Bra007438.1-P	Field mustard	cytosol	26.44	47.03
PGSC0003DMT400057126	Potato	cytosol, mitochondrion, nucleus, plastid	42.55	46.98
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	50.15	41.46
VIT_09s0096g00380.t01	Wine grape	nucleus	11.55	27.14

Protein Annotations

EnsemblPlants:HORVU5Hr1G120790.2	EnsemblPlantsGene:HORVU5Hr1G120790	InterPro:Pirin	InterPro:Pirin_C_dom	InterPro:Pirin_N_dom	InterPro:RmlC_Cupin_sf
PANTHER:PTHR13903	PANTHER:PTHR13903:SF5	PFAM:PF02678	PFAM:PF05726	PIRSF:PIRSF006232	SUPFAM:SSF51182
UniParc:UPI000B46FEE9	UniProt:A0A287SYU7	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:658362252..658364059

Molecular Weight (calculated)

36186.1 Da

IEP (calculated)

8.247

GRAVY (calculated)

-0.293

Length

329 amino acids

Sequence
(BLAST)

001: MASSSSSITF ENPRKVVKKV MSLSQSEGDG ATVRRSIGGH EVRNLDPFLL LDEFSVSKPA GFPDHPHRGF ETVTYMLDVR THALLLPSRA LFRSAREVFA
101: EKAVLSCRFV PMQGAFTHQD FSGHKGTIRT GDVQWMTAGR GIVHSEMPAA DGVHKGLQLW INLASKDKMI EPRYQELESK DVSQAEKDGV AVRIIAGEAF
201: GVRSPVYTRT PTMYMDFTMQ PGSQLHQPIP EGWNAFVYII EGEGVFGKEG TAPASAHNCL VLGAGDGLSV WNRSGAPLRF VLAAGQPLKE SVVQQGPFVM
301: NSRAQIQKAM EDYYYGRNGF EKASQWSST

Best Arabidopsis Sequence Match ( AT1G50590.1 )
(BLAST)

001: MPISEKSSAT NTRLVVKKLF ARQLHEGFGA VVRRSIGRFE FRYFDPFLVL DEFSVSAPAG FPDHPHRGFE TVTYMLEGEI LHEDCEGHKG VIREGGLQWM
101: TAGKGIVHSE MPSSNSNGIT HNKGLQLWIN LSSRQKLVEP SYQEIESKDI AETEKDGVRV RVIAGEWNGV KSKICTRTPT MYLDFTLSPG SRISQPIPLH
201: WNAFVYVLQG HGHFGDSKLQ HSAAAAHHLL VLGLGGDMLE AWNGSDSGLP LRFILVAGEP IGEPMVQFGP FVMNTQEEID ETIDDFENFR NGFEKARHWK
301: SQAASALGLF

Arabidopsis Description

Pirin-like protein At1g50590 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.