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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98356 Canola cytosol 83.39 85.61
Bra003367.1-P Field mustard cytosol 56.83 80.63
AT3G59260.1 Thale cress cytosol 78.97 78.97
CDY06015 Canola cytosol 72.69 69.37
CDY57498 Canola cytosol 69.37 67.63
CDX89016 Canola nucleus 68.63 64.14
CDY00611 Canola nucleus 66.79 62.63
CDY06016 Canola cytosol 60.89 61.8
CDY55513 Canola plastid 67.16 61.49
VIT_05s0094g00610.t01 Wine grape cytosol 24.35 61.11
CDY57499 Canola cytoskeleton, cytosol, nucleus 69.37 60.84
CDY17946 Canola mitochondrion 68.63 58.49
CDX83501 Canola mitochondrion 69.0 58.44
CDY42802 Canola mitochondrion 69.0 58.26
VIT_05s0062g01190.t01 Wine grape cytosol, nucleus, peroxisome 61.62 56.8
PGSC0003DMT400031088 Potato cytosol 60.89 55.74
GSMUA_Achr10P... Banana cytosol 57.2 52.01
Solyc09g098160.2.1 Tomato mitochondrion 55.72 51.89
PGSC0003DMT400031070 Potato mitochondrion 54.98 51.74
GSMUA_Achr3P02460_001 Banana cytosol 55.72 51.19
CDY17721 Canola mitochondrion 36.53 50.51
TraesCS5B01G535900.1 Wheat plastid 54.61 50.34
Solyc09g098180.2.1 Tomato plastid 60.89 50.0
TraesCS5D01G533400.1 Wheat cytosol 54.24 50.0
TraesCS4A01G336100.1 Wheat nucleus 54.24 50.0
KRH01821 Soybean plastid 59.78 50.0
KRH46866 Soybean plastid 59.78 49.85
GSMUA_Achr9P01680_001 Banana cytosol 54.61 49.83
TraesCS5D01G533500.1 Wheat plastid 54.61 49.17
TraesCS5D01G533200.1 Wheat cytosol, mitochondrion, nucleus, plastid 52.77 49.14
Os09t0484800-01 Rice cytosol, mitochondrion 53.51 48.82
EER96962 Sorghum cytosol 52.4 48.3
GSMUA_Achr3P11020_001 Banana cytosol 53.51 48.17
Zm00001d008595_P001 Maize plastid 57.2 46.83
Zm00001d020915_P002 Maize cytosol 50.55 46.28
TraesCS4A01G335900.1 Wheat plastid 49.45 45.58
TraesCS5B01G261100.1 Wheat mitochondrion 51.29 45.57
TraesCS5D01G270300.1 Wheat cytosol 50.92 45.54
HORVU5Hr1G092220.3 Barley mitochondrion, peroxisome 21.77 45.38
HORVU5Hr1G072760.2 Barley mitochondrion 50.18 44.88
HORVU5Hr1G120790.2 Barley cytosol 54.24 44.68
Zm00001d009514_P001 Maize cytosol, endoplasmic reticulum 16.24 44.44
TraesCS5A01G262700.1 Wheat mitochondrion 50.92 43.95
CDY22806 Canola cytosol 50.18 43.73
CDY37125 Canola cytosol 50.18 43.73
OQU90634 Sorghum mitochondrion 56.83 43.14
Os03t0845000-01 Rice plasma membrane 56.46 42.38
TraesCS5B01G536000.2 Wheat plastid 54.61 40.0
Zm00001d034829_P001 Maize mitochondrion 55.72 39.84
Os08t0364900-00 Rice plastid 51.66 39.77
TraesCS4A01G336200.2 Wheat plastid 54.24 39.73
TraesCS5B01G535800.1 Wheat plastid 53.87 39.25
TraesCS5B01G535700.3 Wheat plastid 53.14 39.02
TraesCS4A01G336000.2 Wheat nucleus 47.6 38.97
TraesCS5D01G533100.1 Wheat plastid 53.87 38.73
TraesCS1B01G420000.1 Wheat plastid 51.29 38.61
TraesCS1D01G400000.1 Wheat plastid 50.55 38.06
HORVU5Hr1G120780.3 Barley plastid 53.51 37.76
TraesCS1A01G391900.1 Wheat plastid 50.18 37.57
VIT_09s0096g00130.t01 Wine grape cytosol, nucleus, plastid 13.28 36.0
Zm00001d046171_P001 Maize endoplasmic reticulum, mitochondrion, nucleus, plastid 26.57 35.82
EES14882 Sorghum cytosol, plastid 48.34 34.66
Zm00001d032363_P001 Maize cytosol 47.23 34.13
HORVU1Hr1G086450.3 Barley endoplasmic reticulum, plastid 49.82 33.92
HORVU5Hr1G120800.4 Barley plastid 55.35 33.78
HORVU5Hr1G120810.1 Barley plastid 26.94 29.32
VIT_09s0096g00380.t01 Wine grape nucleus 5.54 10.71
Protein Annotations
EnsemblPlants:CDX67787EnsemblPlantsGene:GSBRNA2T00098980001Gene3D:2.60.120.10InterPro:IPR014710InterPro:PirinInterPro:Pirin_C_dom
InterPro:Pirin_N_domInterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfPANTHER:PTHR13903PANTHER:PTHR13903:SF5PFAM:PF02678
PFAM:PF05726PIRSF:PIRSF006232ProteinID:CDX67787ProteinID:CDX67787.1SUPFAM:SSF51182UniParc:UPI0004EEF8B5
MapMan:35.1:::::
Description
BnaA07g18270D
Coordinates
chrLK031787:+:2251276..2252638
Molecular Weight (calculated)
29880.3 Da
IEP (calculated)
4.448
GRAVY (calculated)
-0.194
Length
271 amino acids
Sequence
(BLAST)
001: MKVMVLLLEK ASPSEIDHEL LDPFVSLVEF SVSPPGGFRD HPHRGFESVT YMLQGGIIYQ DFNGHKITIH EGDVQWMTAG KGIIHSEMPE EQVNNGLQLW
101: INLPSVDKMI DPKALELSSS EIPRAEEDGV EVKVIAGESM GVQSLSYTEV PIMFLDFTLK PKAQTHQTVP ESWTAFAYVI DGDEDVFSSS DSSTVQAHSV
201: VVFGKGDGVS VLNTSSSKPL RFLLIAGEPI GEHVVQHGPF VMNSQAEIDM TIEDYRNAKN GFEGAKSWRS E
Best Arabidopsis Sequence Match ( AT3G59260.1 )
(BLAST)
001: MKVMVLSLGK ASPSKSDHEL LDPFVSLVEF SVSPPGGFKD HPHRGFESVT YMFQGGIIHQ DCNGNKGTIH EGDVQWMTAG RGIIHSEMPE EQVNKGLQLW
101: INLPSSAKMI EPKNIEISSS EIPSADDYGV EVKVIAGESM GVKSPFYTKT PIMFLDFTLD PKAQTHQAVP ESWTAFAYIV EGDEGVFSSS DSSTVQAHNV
201: VVFGTGDEVS VWNTSNSRPL RFLLIAGEPI GEPVVQHGPF VMNSQDEIEM TIGDYRNGMN GFEMAKHWRS E
Arabidopsis Description
Putative pirin-like protein At3g59260 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX45]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.