Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra007438.1-P | Field mustard | cytosol | 67.54 | 69.73 |
Bra007437.1-P | Field mustard | cytosol | 63.87 | 62.24 |
CDX67787 | Canola | nucleus | 80.63 | 56.83 |
CDX98356 | Canola | cytosol | 73.82 | 53.41 |
AT3G59260.1 | Thale cress | cytosol | 67.54 | 47.6 |
Bra014547.1-P | Field mustard | nucleus | 63.35 | 41.72 |
Bra000289.1-P | Field mustard | cytosol | 63.87 | 41.36 |
Bra004746.1-P | Field mustard | plastid | 63.35 | 40.88 |
VIT_05s0062g01190.t01 | Wine grape | cytosol, nucleus, peroxisome | 56.02 | 36.39 |
PGSC0003DMT400031088 | Potato | cytosol | 56.02 | 36.15 |
GSMUA_Achr10P... | Banana | cytosol | 50.79 | 32.55 |
Solyc09g098180.2.1 | Tomato | plastid | 56.02 | 32.42 |
Solyc09g098160.2.1 | Tomato | mitochondrion | 49.21 | 32.3 |
GSMUA_Achr3P02460_001 | Banana | cytosol | 49.74 | 32.2 |
PGSC0003DMT400031070 | Potato | mitochondrion | 48.17 | 31.94 |
GSMUA_Achr3P11020_001 | Banana | cytosol | 50.26 | 31.89 |
Os09t0484800-01 | Rice | cytosol, mitochondrion | 49.21 | 31.65 |
TraesCS5B01G535900.1 | Wheat | plastid | 48.17 | 31.29 |
EER96962 | Sorghum | cytosol | 48.17 | 31.29 |
KRH01821 | Soybean | plastid | 52.88 | 31.17 |
GSMUA_Achr9P01680_001 | Banana | cytosol | 48.17 | 30.98 |
TraesCS4A01G336100.1 | Wheat | nucleus | 47.64 | 30.95 |
TraesCS5D01G533400.1 | Wheat | cytosol | 47.12 | 30.61 |
TraesCS4A01G335900.1 | Wheat | plastid | 47.12 | 30.61 |
TraesCS5D01G533500.1 | Wheat | plastid | 48.17 | 30.56 |
KRH46866 | Soybean | plastid | 51.83 | 30.46 |
TraesCS5D01G533200.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 46.07 | 30.24 |
Zm00001d008595_P001 | Maize | plastid | 51.31 | 29.61 |
Zm00001d020915_P002 | Maize | cytosol | 45.55 | 29.39 |
TraesCS5B01G261100.1 | Wheat | mitochondrion | 46.6 | 29.18 |
TraesCS5D01G270300.1 | Wheat | cytosol | 46.07 | 29.04 |
HORVU5Hr1G072760.2 | Barley | mitochondrion | 45.03 | 28.38 |
TraesCS5A01G262700.1 | Wheat | mitochondrion | 46.6 | 28.34 |
Bra018859.1-P | Field mustard | cytosol | 45.55 | 27.97 |
HORVU5Hr1G120790.2 | Barley | cytosol | 47.12 | 27.36 |
OQU90634 | Sorghum | mitochondrion | 50.26 | 26.89 |
Os03t0845000-01 | Rice | plasma membrane | 50.26 | 26.59 |
TraesCS4A01G336000.2 | Wheat | nucleus | 46.07 | 26.59 |
TraesCS4A01G336200.2 | Wheat | plastid | 48.69 | 25.14 |
TraesCS5B01G536000.2 | Wheat | plastid | 48.17 | 24.86 |
Zm00001d034829_P001 | Maize | mitochondrion | 49.21 | 24.8 |
TraesCS5B01G535700.3 | Wheat | plastid | 47.64 | 24.66 |
TraesCS5B01G535800.1 | Wheat | plastid | 47.12 | 24.19 |
TraesCS5D01G533100.1 | Wheat | plastid | 46.6 | 23.61 |
HORVU5Hr1G120780.3 | Barley | plastid | 46.6 | 23.18 |
TraesCS1B01G420000.1 | Wheat | plastid | 42.93 | 22.78 |
Os08t0364900-00 | Rice | plastid | 41.88 | 22.73 |
TraesCS1D01G400000.1 | Wheat | plastid | 41.88 | 22.22 |
TraesCS1A01G391900.1 | Wheat | plastid | 41.36 | 21.82 |
HORVU5Hr1G120800.4 | Barley | plastid | 48.69 | 20.95 |
HORVU1Hr1G086450.3 | Barley | endoplasmic reticulum, plastid | 41.88 | 20.1 |
EES14882 | Sorghum | cytosol, plastid | 38.74 | 19.58 |
Zm00001d032363_P001 | Maize | cytosol | 37.7 | 19.2 |
HORVU5Hr1G120810.1 | Barley | plastid | 24.61 | 18.88 |
Zm00001d046171_P001 | Maize | endoplasmic reticulum, mitochondrion, nucleus, plastid | 13.09 | 12.44 |
VIT_05s0094g00610.t01 | Wine grape | cytosol | 6.28 | 11.11 |
VIT_09s0096g00130.t01 | Wine grape | cytosol, nucleus, plastid | 3.66 | 7.0 |
HORVU5Hr1G092220.3 | Barley | mitochondrion, peroxisome | 3.66 | 5.38 |
VIT_09s0096g00380.t01 | Wine grape | nucleus | 3.66 | 5.0 |
Zm00001d009514_P001 | Maize | cytosol, endoplasmic reticulum | 0.52 | 1.01 |
Protein Annotations
EnsemblPlants:Bra003367.1 | EnsemblPlants:Bra003367.1-P | EnsemblPlantsGene:Bra003367 | Gene3D:2.60.120.10 | InterPro:IPR014710 | InterPro:Pirin |
InterPro:Pirin_C_dom | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | PANTHER:PTHR13903 | PANTHER:PTHR13903:SF5 | PFAM:PF05726 |
PIRSF:PIRSF006232 | SUPFAM:SSF51182 | UniParc:UPI0002541705 | UniProt:M4CGN4 | MapMan:35.1 | : |
Description
AT3G59260 (E=2e-070) | pirin, putative
Coordinates
chrA07:+:12875326..12876686
Molecular Weight (calculated)
20634.3 Da
IEP (calculated)
4.558
GRAVY (calculated)
-0.149
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLRQVIKKI SADLENEGDG AVVRKSITNI DPKAVELSSS EIPRAEEDGV EVKVIAGESM GVQSLSYTKV PIMFLDFTLQ PRAQTHQTVP ESWTAFAYVI
101: DGEEGVFSTS DSSTVQAHSV VVFGKGDGVS VLNTSSSKLL RFLLIAGEPI GEPVVQHGPF VMNSQAEIDL TIGDYRNAKN GFEGAKSWRS E
101: DGEEGVFSTS DSSTVQAHSV VVFGKGDGVS VLNTSSSKLL RFLLIAGEPI GEPVVQHGPF VMNSQAEIDL TIGDYRNAKN GFEGAKSWRS E
001: MKVMVLSLGK ASPSKSDHEL LDPFVSLVEF SVSPPGGFKD HPHRGFESVT YMFQGGIIHQ DCNGNKGTIH EGDVQWMTAG RGIIHSEMPE EQVNKGLQLW
101: INLPSSAKMI EPKNIEISSS EIPSADDYGV EVKVIAGESM GVKSPFYTKT PIMFLDFTLD PKAQTHQAVP ESWTAFAYIV EGDEGVFSSS DSSTVQAHNV
201: VVFGTGDEVS VWNTSNSRPL RFLLIAGEPI GEPVVQHGPF VMNSQDEIEM TIGDYRNGMN GFEMAKHWRS E
101: INLPSSAKMI EPKNIEISSS EIPSADDYGV EVKVIAGESM GVKSPFYTKT PIMFLDFTLD PKAQTHQAVP ESWTAFAYIV EGDEGVFSSS DSSTVQAHNV
201: VVFGTGDEVS VWNTSNSRPL RFLLIAGEPI GEPVVQHGPF VMNSQDEIEM TIGDYRNGMN GFEMAKHWRS E
Arabidopsis Description
Putative pirin-like protein At3g59260 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX45]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.