Factsheet for Bra007437.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra018585.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59220.1	Bra018585.1-P	AT1G09030.1	17322342

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06016	Canola	cytosol	97.96	71.91
Bra003367.1-P	Field mustard	cytosol	62.24	63.87
CDY57499	Canola	cytoskeleton, cytosol, nucleus	97.45	61.81
Bra007438.1-P	Field mustard	cytosol	57.14	60.54
Bra014547.1-P	Field mustard	nucleus	81.63	55.17
AT3G59220.1	Thale cress	cytosol	79.59	54.36
Bra000289.1-P	Field mustard	cytosol	64.29	42.71
Bra004746.1-P	Field mustard	plastid	64.29	42.57
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	57.14	38.1
PGSC0003DMT400031088	Potato	cytosol	56.12	37.16
PGSC0003DMT400031070	Potato	mitochondrion	52.04	35.42
Solyc09g098160.2.1	Tomato	mitochondrion	52.04	35.05
GSMUA_Achr10P...	Banana	cytosol	53.06	34.9
GSMUA_Achr3P02460_001	Banana	cytosol	52.04	34.58
TraesCS4A01G336100.1	Wheat	nucleus	50.51	33.67
TraesCS5B01G535900.1	Wheat	plastid	50.51	33.67
Solyc09g098180.2.1	Tomato	plastid	56.12	33.33
TraesCS5D01G533400.1	Wheat	cytosol	50.0	33.33
TraesCS5D01G533500.1	Wheat	plastid	51.02	33.22
GSMUA_Achr9P01680_001	Banana	cytosol	50.0	33.0
Os09t0484800-01	Rice	cytosol, mitochondrion	49.49	32.66
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	48.47	32.65
EER96962	Sorghum	cytosol	48.47	32.31
TraesCS4A01G335900.1	Wheat	plastid	47.96	31.97
KRH01821	Soybean	plastid	52.55	31.79
GSMUA_Achr3P11020_001	Banana	cytosol	48.47	31.56
Zm00001d008595_P001	Maize	plastid	53.06	31.42
Zm00001d020915_P002	Maize	cytosol	46.94	31.08
KRH46866	Soybean	plastid	51.53	31.08
HORVU5Hr1G072760.2	Barley	mitochondrion	46.94	30.36
TraesCS5B01G261100.1	Wheat	mitochondrion	46.94	30.16
TraesCS5D01G270300.1	Wheat	cytosol	45.92	29.7
HORVU5Hr1G120790.2	Barley	cytosol	49.49	29.48
OQU90634	Sorghum	mitochondrion	53.57	29.41
TraesCS5A01G262700.1	Wheat	mitochondrion	46.43	28.98
Bra018859.1-P	Field mustard	cytosol	45.41	28.62
Os03t0845000-01	Rice	plasma membrane	52.55	28.53
TraesCS4A01G336000.2	Wheat	nucleus	47.45	28.1
TraesCS5B01G536000.2	Wheat	plastid	51.02	27.03
Zm00001d034829_P001	Maize	mitochondrion	52.04	26.91
TraesCS5B01G535700.3	Wheat	plastid	50.0	26.56
TraesCS4A01G336200.2	Wheat	plastid	50.0	26.49
TraesCS5B01G535800.1	Wheat	plastid	49.49	26.08
TraesCS5D01G533100.1	Wheat	plastid	49.49	25.73
HORVU5Hr1G120780.3	Barley	plastid	48.98	25.0
TraesCS1B01G420000.1	Wheat	plastid	43.88	23.89
Os08t0364900-00	Rice	plastid	41.84	23.3
TraesCS1A01G391900.1	Wheat	plastid	41.84	22.65
HORVU5Hr1G120800.4	Barley	plastid	51.02	22.52
TraesCS1D01G400000.1	Wheat	plastid	41.33	22.5
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	40.82	20.1
HORVU5Hr1G120810.1	Barley	plastid	25.0	19.68
Zm00001d032363_P001	Maize	cytosol	36.73	19.2
EES14882	Sorghum	cytosol, plastid	35.2	18.25
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	7.65	15.0
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	14.8	14.43
VIT_05s0094g00610.t01	Wine grape	cytosol	7.65	13.89
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	7.65	11.54
VIT_09s0096g00380.t01	Wine grape	nucleus	8.16	11.43
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	1.02	2.02

Protein Annotations

EnsemblPlants:Bra007437.1	EnsemblPlants:Bra007437.1-P	EnsemblPlantsGene:Bra007437	Gene3D:2.60.120.10	InterPro:IPR014710	InterPro:Pirin
InterPro:Pirin_C_dom	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903	PANTHER:PTHR13903:SF5	PFAM:PF05726
PIRSF:PIRSF006232	SUPFAM:SSF51182	UniParc:UPI0002542E63	UniProt:M4CT94	MapMan:35.1	:

Description

AT3G59220 (E=4e-076) PRN, PRN1, ATPIRIN1 | PRN (PIRIN); calmodulin binding

Coordinates

chrA09:+:29210188..29211913

Molecular Weight (calculated)

21379.5 Da

IEP (calculated)

4.772

GRAVY (calculated)

-0.115

Length

196 amino acids

Sequence
(BLAST)

001: MSASCDSDRV TRQVIKNVLA KLQKEGEGAL VRNGITEIEP KNLELSSLEI PRAEKDGVEV KVIAGDSLGI KSPYYTTTPI MFLDFTLKPG SQTHQTVPES
101: WTAFAYILEG DEGVFGSLKS LAIQAHHVVV FGPGDLVSVW NKSTSRALRF LLIAGEPIGE PLVQCGPFVM SSQDEIDMAF EDYRNAKNGF ELAKSS

Best Arabidopsis Sequence Match ( AT3G59220.1 )
(BLAST)

001: MTYENNSVPR IVIKKVLAKL EKEGEGAVVR NGITKIDQKL LDPFVLLVEF SFSLSAGFPD HPHRGFESVT YMLQGGIIHK DPKGHKGTIQ AGDVQWMTAG
101: RGIIHSEFPE EEVNNGLQLW INLPSTEKMT EPKYKELSSL DIPRAEENGV EVKVIAGDSM GIKSPVYTRT PTMFLDFTLK PGSQTHQTVP ESWTAFAYII
201: EGDEGVFGSL NSSAISAHHV VVFGPGDLVS VWNKSTSRSL RFLLIAGEPI GEPVVQCGPF VMNSQAEIDM AFDDYQNAKN GFEMAKC

Arabidopsis Description

PRN1Pirin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.