Factsheet for AT3G59220.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89016	Canola	nucleus	82.23	81.38
Bra014547.1-P	Field mustard	nucleus	81.53	80.69
CDY06016	Canola	cytosol	74.22	79.78
Bra007437.1-P	Field mustard	cytosol	54.36	79.59
CDY00611	Canola	nucleus	78.4	77.85
CDY57499	Canola	cytoskeleton, cytosol, nucleus	82.23	76.38
AT3G59260.1	Thale cress	cytosol	66.55	70.48
VIT_05s0094g00610.t01	Wine grape	cytosol	23.69	62.96
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	64.46	62.93
PGSC0003DMT400031088	Potato	cytosol	64.81	62.84
PGSC0003DMT400031070	Potato	mitochondrion	60.28	60.07
Solyc09g098160.2.1	Tomato	mitochondrion	60.63	59.79
GSMUA_Achr3P02460_001	Banana	cytosol	60.28	58.64
AT2G43120.2	Thale cress	nucleus	74.91	57.8
GSMUA_Achr10P...	Banana	cytosol	59.93	57.72
GSMUA_Achr9P01680_001	Banana	cytosol	59.58	57.58
TraesCS5D01G533400.1	Wheat	cytosol	58.88	57.48
TraesCS4A01G336100.1	Wheat	nucleus	58.54	57.14
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	25.78	56.92
TraesCS5B01G535900.1	Wheat	plastid	58.19	56.8
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	57.49	56.7
TraesCS5D01G533500.1	Wheat	plastid	58.54	55.81
KRH01821	Soybean	plastid	62.72	55.56
Solyc09g098180.2.1	Tomato	plastid	63.41	55.15
EER96962	Sorghum	cytosol	56.45	55.1
KRH46866	Soybean	plastid	62.02	54.77
Os09t0484800-01	Rice	cytosol, mitochondrion	56.45	54.55
GSMUA_Achr3P11020_001	Banana	cytosol	57.14	54.49
Zm00001d020915_P002	Maize	cytosol	55.4	53.72
HORVU5Hr1G072760.2	Barley	mitochondrion	55.05	52.15
TraesCS5B01G261100.1	Wheat	mitochondrion	55.4	52.13
TraesCS5D01G270300.1	Wheat	cytosol	54.36	51.49
Zm00001d008595_P001	Maize	plastid	58.88	51.06
TraesCS4A01G335900.1	Wheat	plastid	52.26	51.02
HORVU5Hr1G120790.2	Barley	cytosol	57.84	50.46
TraesCS5A01G262700.1	Wheat	mitochondrion	54.7	50.0
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	17.42	50.0
AT1G50590.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	53.31	49.35
OQU90634	Sorghum	mitochondrion	59.23	47.62
Os03t0845000-01	Rice	plasma membrane	59.23	47.09
TraesCS4A01G336000.2	Wheat	nucleus	53.66	46.53
TraesCS5B01G536000.2	Wheat	plastid	58.88	45.68
TraesCS5B01G535700.3	Wheat	plastid	58.19	45.26
TraesCS4A01G336200.2	Wheat	plastid	58.19	45.14
Zm00001d034829_P001	Maize	mitochondrion	59.23	44.85
TraesCS5B01G535800.1	Wheat	plastid	57.49	44.35
TraesCS5D01G533100.1	Wheat	plastid	57.84	44.03
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	14.98	43.43
HORVU5Hr1G120780.3	Barley	plastid	57.14	42.71
Os08t0364900-00	Rice	plastid	50.17	40.91
TraesCS1B01G420000.1	Wheat	plastid	50.52	40.28
TraesCS1D01G400000.1	Wheat	plastid	50.17	40.0
TraesCS1A01G391900.1	Wheat	plastid	49.83	39.5
HORVU5Hr1G120800.4	Barley	plastid	59.23	38.29
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	26.48	37.81
Zm00001d032363_P001	Maize	cytosol	45.64	34.93
EES14882	Sorghum	cytosol, plastid	45.64	34.66
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	47.74	34.42
HORVU5Hr1G120810.1	Barley	plastid	28.92	33.33
VIT_09s0096g00380.t01	Wine grape	nucleus	10.1	20.71

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:825091	ProteinID:AEE79893.1	EMBL:AF353716	ArrayExpress:AT3G59220
EnsemblPlantsGene:AT3G59220	RefSeq:AT3G59220	TAIR:AT3G59220	RefSeq:AT3G59220-TAIR-G	EnsemblPlants:AT3G59220.1	TAIR:AT3G59220.1
EMBL:BT026056	ProteinID:CAB91592.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009628	GO:GO:0009719	GO:GO:0009737	GO:GO:0009738	GO:GO:0009785	GO:GO:0009987
InterPro:IPR014710	RefSeq:NP_191481.1	PFAM:PF02678	PFAM:PF05726	PIRSF:PIRSF006232	PO:PO:0000037
PO:PO:0000293	PO:PO:0001185	PO:PO:0007115	PO:PO:0007611	PO:PO:0007616	PO:PO:0009005
PO:PO:0009009	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020100	PO:PO:0025022	Symbol:PRN
PANTHER:PTHR13903	PANTHER:PTHR13903:SF5	InterPro:Pirin	InterPro:Pirin_C_dom	InterPro:Pirin_N_dom	UniProt:Q147N7
UniProt:Q9LX49	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SUPFAM:SSF51182	UniParc:UPI00000010D3	:

Description

PRN1Pirin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX49]

Coordinates

chr3:+:21893812..21895789

Molecular Weight (calculated)

31604.8 Da

IEP (calculated)

5.192

GRAVY (calculated)

-0.198

Length

287 amino acids

Sequence
(BLAST)

001: MTYENNSVPR IVIKKVLAKL EKEGEGAVVR NGITKIDQKL LDPFVLLVEF SFSLSAGFPD HPHRGFESVT YMLQGGIIHK DPKGHKGTIQ AGDVQWMTAG
101: RGIIHSEFPE EEVNNGLQLW INLPSTEKMT EPKYKELSSL DIPRAEENGV EVKVIAGDSM GIKSPVYTRT PTMFLDFTLK PGSQTHQTVP ESWTAFAYII
201: EGDEGVFGSL NSSAISAHHV VVFGPGDLVS VWNKSTSRSL RFLLIAGEPI GEPVVQCGPF VMNSQAEIDM AFDDYQNAKN GFEMAKC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.