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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 3
  • nucleus 4
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004746.1-P Field mustard plastid 73.66 92.57
CDY55513 Canola plastid 73.66 92.57
Bra000289.1-P Field mustard cytosol 73.39 92.54
CDY42802 Canola mitochondrion 78.76 91.28
CDY17946 Canola mitochondrion 75.0 87.74
CDX83501 Canola mitochondrion 73.92 85.94
CDY17721 Canola mitochondrion 44.09 83.67
AT3G59220.1 Thale cress cytosol 57.8 74.91
VIT_05s0062g01190.t01 Wine grape cytosol, nucleus, peroxisome 58.06 73.47
PGSC0003DMT400031088 Potato cytosol 56.45 70.95
VIT_05s0094g00610.t01 Wine grape cytosol 20.43 70.37
AT3G59260.1 Thale cress cytosol 50.81 69.74
PGSC0003DMT400031070 Potato mitochondrion 52.42 67.71
Solyc09g098160.2.1 Tomato mitochondrion 52.69 67.35
KRH01821 Soybean plastid 57.8 66.36
KRH46866 Soybean plastid 57.53 65.85
GSMUA_Achr10P... Banana cytosol 52.42 65.44
HORVU5Hr1G092220.3 Barley mitochondrion, peroxisome 22.85 65.38
GSMUA_Achr9P01680_001 Banana cytosol 51.88 64.98
GSMUA_Achr3P02460_001 Banana cytosol 51.08 64.41
Solyc09g098180.2.1 Tomato plastid 56.45 63.64
TraesCS5B01G535900.1 Wheat plastid 49.73 62.93
GSMUA_Achr3P11020_001 Banana cytosol 50.81 62.79
TraesCS5D01G533400.1 Wheat cytosol 49.46 62.59
TraesCS5D01G533200.1 Wheat cytosol, mitochondrion, nucleus, plastid 48.92 62.54
TraesCS4A01G336100.1 Wheat nucleus 49.19 62.24
Os09t0484800-01 Rice cytosol, mitochondrion 48.92 61.28
VIT_09s0096g00130.t01 Wine grape cytosol, nucleus, plastid 16.4 61.0
EER96962 Sorghum cytosol 47.85 60.54
TraesCS5D01G533500.1 Wheat plastid 48.66 60.13
TraesCS5B01G261100.1 Wheat mitochondrion 48.92 59.67
Zm00001d020915_P002 Maize cytosol 46.77 58.78
TraesCS5D01G270300.1 Wheat cytosol 47.85 58.75
HORVU5Hr1G072760.2 Barley mitochondrion 47.85 58.75
TraesCS5A01G262700.1 Wheat mitochondrion 48.39 57.32
Zm00001d008595_P001 Maize plastid 50.81 57.1
HORVU5Hr1G120790.2 Barley cytosol 49.73 56.23
AT1G50590.1 Thale cress cytosol, mitochondrion, nucleus, plastid 46.51 55.81
TraesCS4A01G335900.1 Wheat plastid 43.55 55.1
OQU90634 Sorghum mitochondrion 52.15 54.34
Os03t0845000-01 Rice plasma membrane 52.69 54.29
Zm00001d009514_P001 Maize cytosol, endoplasmic reticulum 13.98 52.53
TraesCS5B01G535700.3 Wheat plastid 50.27 50.68
Zm00001d034829_P001 Maize mitochondrion 51.34 50.4
TraesCS4A01G336000.2 Wheat nucleus 44.62 50.15
TraesCS4A01G336200.2 Wheat plastid 49.73 50.0
TraesCS5B01G536000.2 Wheat plastid 49.46 49.73
TraesCS5D01G533100.1 Wheat plastid 50.27 49.6
HORVU5Hr1G120780.3 Barley plastid 51.08 49.48
TraesCS5B01G535800.1 Wheat plastid 49.46 49.46
Zm00001d046171_P001 Maize endoplasmic reticulum, mitochondrion, nucleus, plastid 23.92 44.28
TraesCS1A01G391900.1 Wheat plastid 42.74 43.92
TraesCS1B01G420000.1 Wheat plastid 42.2 43.61
Os08t0364900-00 Rice plastid 41.13 43.47
TraesCS1D01G400000.1 Wheat plastid 41.13 42.5
HORVU5Hr1G120800.4 Barley plastid 50.0 41.89
HORVU5Hr1G120810.1 Barley plastid 25.81 38.55
EES14882 Sorghum cytosol, plastid 38.71 38.1
HORVU1Hr1G086450.3 Barley endoplasmic reticulum, plastid 40.59 37.94
Zm00001d032363_P001 Maize cytosol 38.17 37.87
VIT_09s0096g00380.t01 Wine grape nucleus 12.63 33.57
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1EntrezGene:818914UniProt:A0A1P8AYK1EMBL:AC004450ProteinID:AEC10211.1
EMBL:AK228809ProteinID:ANM61725.1ArrayExpress:AT2G43120EnsemblPlantsGene:AT2G43120RefSeq:AT2G43120TAIR:AT2G43120
RefSeq:AT2G43120-TAIR-GEnsemblPlants:AT2G43120.2EMBL:BT029512GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829
GO:GO:0005886GO:GO:0006950GO:GO:0006952GO:GO:0008150GO:GO:0008152GO:GO:0009605
GO:GO:0009607GO:GO:0009987GO:GO:0010466GO:GO:0016020GO:GO:0019538GO:GO:0030234
GO:GO:0030414GO:GO:0042742GO:GO:0046872InterPro:IPR014710RefSeq:NP_001323927.1RefSeq:NP_850385.1
PFAM:PF02678PFAM:PF05726PIRSF:PIRSF006232PANTHER:PTHR13903PANTHER:PTHR13903:SF5InterPro:Pirin
InterPro:Pirin_C_domInterPro:Pirin_N_domInterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSUPFAM:SSF51182UniParc:UPI00084890DD
SEG:seg:::::
Description
RmlC-like cupins superfamily protein [Source:TAIR;Acc:AT2G43120]
Coordinates
chr2:+:17927181..17929085
Molecular Weight (calculated)
41585.4 Da
IEP (calculated)
9.061
GRAVY (calculated)
-0.496
Length
372 amino acids
Sequence
(BLAST)
001: MAHNQFKDSL DPLSSINRHT ESQHQNTSKI RLLPRKATKK KKREEKTTLK YMRAAINRAN SLGGLFSFRF IRNIKSMSSS TSQDFVSRPV IKKVFAKLQK
101: EGDGAVVRRG ISRSEQKLLD PFLMLDEFSV SPPAGFPDHP HRGFETVTYV LEGGITHQDF KGHKGTIYAG DVQWMTAGRG IIHSEMPEEE VNKGLQLWIN
201: LSSNEKMIEP NYQELSHSDI PKAEQNGVEV KVIAGESMGI QSPVYTRTPT MFLDFTLQPG AQIHQNVPES WNAFAYILES GEGGGVFSSS NSSPIPAHSV
301: VVFGPGNDGV SVWNKSSSKQ LRFVLIAGEP IGEPVVQYGP FVMNTQAEID MTIEDYHYGK NGFEMAKYWR SQ
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.