Factsheet for HORVU5Hr1G120780.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G098490.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59220.1	HORVU3Hr1G098490.1	AT1G09030.1	17322342

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	67.19	88.66
TraesCS4A01G335900.1	Wheat	plastid	64.58	84.35
HORVU5Hr1G120790.2	Barley	cytosol	71.09	82.98
TraesCS5B01G535700.3	Wheat	plastid	75.0	78.05
TraesCS5B01G535800.1	Wheat	plastid	73.96	76.34
TraesCS5D01G533100.1	Wheat	plastid	74.48	75.86
TraesCS4A01G336000.2	Wheat	nucleus	62.76	72.81
VIT_05s0094g00610.t01	Wine grape	cytosol	20.31	72.22
GSMUA_Achr3P02460_001	Banana	cytosol	54.69	71.19
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	54.43	71.09
Solyc09g098160.2.1	Tomato	mitochondrion	53.39	70.45
PGSC0003DMT400031088	Potato	cytosol	54.17	70.27
GSMUA_Achr10P...	Banana	cytosol	54.43	70.13
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	23.7	70.0
GSMUA_Achr9P01680_001	Banana	cytosol	53.91	69.7
Zm00001d008595_P001	Maize	plastid	59.9	69.49
PGSC0003DMT400031070	Potato	mitochondrion	52.08	69.44
Os03t0845000-01	Rice	plasma membrane	63.8	67.87
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	17.45	67.0
OQU90634	Sorghum	mitochondrion	61.72	66.39
VIT_19s0090g01530.t01	Wine grape	cytosol	50.0	64.43
KRH01821	Soybean	plastid	53.91	63.89
Zm00001d034829_P001	Maize	mitochondrion	62.76	63.59
KRH46866	Soybean	plastid	53.65	63.38
Solyc09g098180.2.1	Tomato	plastid	54.43	63.33
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	16.15	62.63
HORVU5Hr1G120800.4	Barley	plastid	72.4	62.61
CDY55513	Canola	plastid	47.92	62.16
Bra004746.1-P	Field mustard	plastid	47.92	62.16
Bra000289.1-P	Field mustard	cytosol	46.88	61.02
PGSC0003DMT400033425	Potato	mitochondrion	46.35	60.75
CDY17721	Canola	mitochondrion	30.99	60.71
KRH14295	Soybean	cytosol	47.4	60.47
KRH73851	Soybean	cytoskeleton, cytosol, nucleus	47.4	60.47
KRH46283	Soybean	mitochondrion	46.61	60.07
CDY17946	Canola	mitochondrion	48.96	59.12
HORVU5Hr1G072760.2	Barley	mitochondrion	46.61	59.08
CDY42802	Canola	mitochondrion	48.44	57.94
CDX83501	Canola	mitochondrion	48.18	57.81
AT3G59220.1	Thale cress	cytosol	42.71	57.14
KRG98621	Soybean	nucleus	33.59	56.83
CDY22806	Canola	cytosol	45.31	55.95
CDY37125	Canola	cytosol	45.05	55.63
Bra018859.1-P	Field mustard	cytosol	44.79	55.31
AT1G50590.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	44.53	55.16
AT3G59260.1	Thale cress	cytosol	38.02	53.87
Solyc12g014590.1.1	Tomato	mitochondrion	45.83	53.82
CDX67787	Canola	nucleus	37.76	53.51
CDX98356	Canola	cytosol	35.94	52.27
CDX89016	Canola	nucleus	39.32	52.07
HORVU5Hr1G120810.1	Barley	plastid	33.59	51.81
CDY06015	Canola	cytosol	38.28	51.76
Bra014547.1-P	Field mustard	nucleus	39.06	51.72
CDY57498	Canola	cytosol	37.24	51.44
CDY06016	Canola	cytosol	35.68	51.31
AT2G43120.2	Thale cress	nucleus	49.48	51.08
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	26.56	50.75
CDY00611	Canola	nucleus	38.02	50.52
CDY57499	Canola	cytoskeleton, cytosol, nucleus	39.84	49.51
Bra007437.1-P	Field mustard	cytosol	25.0	48.98
Solyc07g065160.2.1	Tomato	mitochondrion	37.24	47.99
PGSC0003DMT400057126	Potato	cytosol, mitochondrion, nucleus, plastid	36.98	47.65
Bra003367.1-P	Field mustard	cytosol	23.18	46.6
Bra007438.1-P	Field mustard	cytosol	21.88	45.41
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	44.27	42.71
VIT_09s0096g00380.t01	Wine grape	nucleus	11.46	31.43

Protein Annotations

EnsemblPlants:HORVU5Hr1G120780.3	EnsemblPlantsGene:HORVU5Hr1G120780	Gene3D:2.60.120.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR014710	InterPro:Pirin	InterPro:Pirin_C_dom	InterPro:Pirin_N_dom	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
PANTHER:PTHR13903	PANTHER:PTHR13903:SF5	PFAM:PF02678	PFAM:PF05726	PIRSF:PIRSF006232	SEG:seg
SUPFAM:SSF51182	TMHMM:TMhelix	UniParc:UPI000B476066	UniProt:A0A287SYR2	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr5H:-:658358157..658359987

Molecular Weight (calculated)

42280.5 Da

IEP (calculated)

9.873

GRAVY (calculated)

-0.230

Length

384 amino acids

Sequence
(BLAST)

001: PHHISPPAPA ATKMLRQHLS LFSFSSSSSP IYTALARLAK RNSSHRVHLA SRNTSSSSRS SANNRPLLFL VLFLLILAVT AVFLFPPAIM SSSSSSVPFE
101: SPRKVVKKVL SLSQSEGDGA TVRRSIGRHE LPNLDPFLLL DEFSVSKPAG FPDHPHRGFE TVTYMLDGAF THQDFSGRKG TIRTGDVHQW MTAGRGIVHS
201: EMPASDGVHK GLQLWINLAS KDKMIKPRYQ ELESKDISQA EKDGVAVRII AGEAFWVRSP VYTRTPTMYM DFTMQPGSQF HQPIPEGWNA FVYIIEGEGV
301: FGKEGAAPAS EHHCLVLGAG DGLIVWNRSG APLRFVLAAG QPLNETVVQQ GPFVMNSRAQ IQKAMEDYYY GRNGFEKASQ WSSA

Best Arabidopsis Sequence Match ( AT1G50590.1 )
(BLAST)

001: MPISEKSSAT NTRLVVKKLF ARQLHEGFGA VVRRSIGRFE FRYFDPFLVL DEFSVSAPAG FPDHPHRGFE TVTYMLEGEI LHEDCEGHKG VIREGGLQWM
101: TAGKGIVHSE MPSSNSNGIT HNKGLQLWIN LSSRQKLVEP SYQEIESKDI AETEKDGVRV RVIAGEWNGV KSKICTRTPT MYLDFTLSPG SRISQPIPLH
201: WNAFVYVLQG HGHFGDSKLQ HSAAAAHHLL VLGLGGDMLE AWNGSDSGLP LRFILVAGEP IGEPMVQFGP FVMNTQEEID ETIDDFENFR NGFEKARHWK
301: SQAASALGLF

Arabidopsis Description

Pirin-like protein At1g50590 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.