Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 3
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G09030.1 | HORVU1Hr1G086450.3 | AT3G59220.1 | 17322342 |
| AT1G09030.1 | HORVU5Hr1G072760.2 | AT3G59220.1 | 17322342 |
| AT1G09030.1 | HORVU5Hr1G092220.3 | AT3G59220.1 | 17322342 |
| AT1G09030.1 | HORVU5Hr1G120780.3 | AT3G59220.1 | 17322342 |
| AT1G09030.1 | HORVU5Hr1G120790.2 | AT3G59220.1 | 17322342 |
| AT1G09030.1 | HORVU5Hr1G120800.4 | AT3G59220.1 | 17322342 |
| AT1G09030.1 | HORVU5Hr1G120810.1 | AT3G59220.1 | 17322342 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G457000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 94.77 | 94.77 |
| TraesCS3D01G450000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 93.6 | 93.6 |
| OQU88166 | Sorghum | cytosol, mitochondrion, nucleus | 52.91 | 62.33 |
| Zm00001d042197_P001 | Maize | plastid | 56.4 | 58.43 |
| GSMUA_Achr8P21910_001 | Banana | cytosol | 35.47 | 51.69 |
| Bra018585.1-P | Field mustard | nucleus | 37.79 | 49.24 |
| CDX95014 | Canola | nucleus | 37.79 | 49.24 |
| PGSC0003DMT400063671 | Potato | nucleus | 37.21 | 46.38 |
| AT1G09030.1 | Thale cress | nucleus | 37.21 | 46.04 |
| KRG92877 | Soybean | nucleus | 36.63 | 45.65 |
| VIT_14s0060g02660.t01 | Wine grape | nucleus | 38.37 | 44.9 |
| KRH33913 | Soybean | nucleus | 36.63 | 44.68 |
| Solyc01g099320.2.1 | Tomato | nucleus | 36.05 | 42.47 |
| VIT_01s0010g01940.t01 | Wine grape | cytosol | 37.21 | 42.11 |
| VIT_01s0010g01910.t01 | Wine grape | cytosol | 37.21 | 42.11 |
| HORVU5Hr1G004870.1 | Barley | nucleus | 26.74 | 39.66 |
| HORVU3Hr1G098500.1 | Barley | nucleus | 41.28 | 38.8 |
| HORVU7Hr1G119940.1 | Barley | nucleus | 28.49 | 37.98 |
| HORVU3Hr1G047250.1 | Barley | nucleus | 29.07 | 36.23 |
| HORVU7Hr1G105460.1 | Barley | nucleus | 34.88 | 34.68 |
| HORVU7Hr1G082430.1 | Barley | nucleus | 23.84 | 33.33 |
| HORVU7Hr1G105500.6 | Barley | nucleus | 34.88 | 32.43 |
| HORVU1Hr1G090450.9 | Barley | nucleus | 30.23 | 31.52 |
| HORVU2Hr1G032320.1 | Barley | nucleus | 36.05 | 27.68 |
| HORVU2Hr1G087460.1 | Barley | nucleus | 36.63 | 25.3 |
| HORVU6Hr1G072110.1 | Barley | nucleus | 33.14 | 23.55 |
| HORVU1Hr1G071620.5 | Barley | nucleus, plastid | 32.56 | 22.22 |
| HORVU6Hr1G072140.1 | Barley | cytosol | 20.93 | 22.09 |
| HORVU3Hr1G087390.1 | Barley | mitochondrion | 30.81 | 20.54 |
| HORVU7Hr1G043520.1 | Barley | nucleus | 30.81 | 16.61 |
| HORVU3Hr1G097680.4 | Barley | cytosol, mitochondrion, nucleus | 15.12 | 8.47 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G098490.1 | EnsemblPlantsGene:HORVU3Hr1G098490 | Gene3D:1.10.20.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | InterPro:CBFA_NFYB_domain |
| InterPro:Histone-fold | InterPro:IPR009072 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF54 | PFAM:PF00808 | PRINTS:PR00615 |
| SUPFAM:SSF47113 | UniParc:UPI0002950C59 | UniProt:M0Z997 | MapMan:15.5.51.2 | : | : |
Description
No Description!
Coordinates
chrchr3H:-:658782619..658783390
Molecular Weight (calculated)
18963.3 Da
IEP (calculated)
7.561
GRAVY (calculated)
-0.787
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNREDFIHF SGFTQQPGRL SLPRAPSTSG SSSGDPNGQE GLLPIANVGR IMKDVLPPAA KVSKHAKEVI QECATEFIGF VTGEASERCR RERRKTVNGD
101: DICHAMKTLG LDNYAGAMRR YLQRYREGEE LTAALNNHSR SPVPPPPDDG MIQIDIWGER SNSRGNEKHG SD
101: DICHAMKTLG LDNYAGAMRR YLQRYREGEE LTAALNNHSR SPVPPPPDDG MIQIDIWGER SNSRGNEKHG SD
001: MAGNYHSFQN PIPRYQNYNF GSSSSNHQHE HDGLVVVVED QQQEESMMVK EQDRLLPIAN VGRIMKNILP ANAKVSKEAK ETMQECVSEF ISFVTGEASD
101: KCHKEKRKTV NGDDICWAMA NLGFDDYAAQ LKKYLHRYRV LEGEKPNHHG KGGPKSSPDN
101: KCHKEKRKTV NGDDICWAMA NLGFDDYAAQ LKKYLHRYRV LEGEKPNHHG KGGPKSSPDN
Arabidopsis Description
NFYB5NF-YB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VUG0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.