Factsheet for HORVU7Hr1G105460.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G105500.6	Barley	nucleus	100.0	93.51
KRH57816	Soybean	cytosol	37.57	83.33
KRH66225	Soybean	cytosol	51.45	82.41
KRG88870	Soybean	cytosol	47.98	76.85
TraesCS3A01G026900.1	Wheat	nucleus	77.46	66.34
Os03t0413000-01	Rice	nucleus	81.5	64.38
TraesCS3B01G017400.1	Wheat	nucleus	78.61	64.15
Zm00001d029505_P001	Maize	nucleus	78.03	60.81
EER94693	Sorghum	nucleus	76.3	58.67
HORVU2Hr1G032320.1	Barley	nucleus	72.25	55.8
HORVU5Hr1G004870.1	Barley	nucleus	36.42	54.31
HORVU7Hr1G119940.1	Barley	nucleus	38.15	51.16
HORVU3Hr1G047250.1	Barley	nucleus	39.88	50.0
HORVU7Hr1G082430.1	Barley	nucleus	34.1	47.97
HORVU1Hr1G090450.9	Barley	nucleus	42.2	44.24
HORVU3Hr1G098500.1	Barley	nucleus	44.51	42.08
HORVU2Hr1G087460.1	Barley	nucleus	53.76	37.35
HORVU1Hr1G071620.5	Barley	nucleus, plastid	52.6	36.11
HORVU3Hr1G098490.1	Barley	cytosol, mitochondrion, nucleus, plastid	34.68	34.88
HORVU3Hr1G087390.1	Barley	mitochondrion	49.13	32.95
HORVU6Hr1G072110.1	Barley	nucleus	42.77	30.58
HORVU7Hr1G043520.1	Barley	nucleus	37.57	20.38
HORVU6Hr1G072140.1	Barley	cytosol	19.08	20.25
HORVU3Hr1G097680.4	Barley	cytosol, mitochondrion, nucleus	20.23	11.4

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	EMBL:AK360970	InterPro:CBFA_NFYB_domain	UniProt:F2DAQ6	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0046982	EnsemblPlantsGene:HORVU7Hr1G105460	EnsemblPlants:HORVU7Hr1G105460.1
InterPro:Histone-fold	InterPro:IPR009072	PFAM:PF00808	PRINTS:PR00615	ScanProsite:PS00685	PANTHER:PTHR11064
PANTHER:PTHR11064:SF87	SUPFAM:SSF47113	InterPro:Transcrpt_fac_NFYB/HAP3_CS	UniParc:UPI00019AA82A	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DAQ6]

Coordinates

chrchr7H:-:617016383..617017035

Molecular Weight (calculated)

18835.2 Da

IEP (calculated)

5.327

GRAVY (calculated)

-0.632

Length

173 amino acids

Sequence
(BLAST)

001: MPDSDNDSSG PSNAGGELSS PREQDRFLPI ANVSRIMKKA LPANAKISKD AKETVQECVS EFISFITGEA SDKCQREKRK TINGDDLLWA MTTLGFEDYV
101: EPLKYYLHKF REIEGERAAP STTTTTASTT PPHLPEMPRS NNAGGYAEYG SGATVPAPGG MMMMGLPTAR RQL

Best Arabidopsis Sequence Match ( AT4G14540.1 )
(BLAST)

001: MADSDNDSGG HKDGGNASTR EQDRFLPIAN VSRIMKKALP ANAKISKDAK ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYVEP
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S

Arabidopsis Description

NFYB3Nuclear transcription factor Y subunit B-3 [Source:UniProtKB/Swiss-Prot;Acc:O23310]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.