Factsheet for HORVU3Hr1G087390.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G347000.1	Wheat	nucleus	61.24	96.93
TraesCS3B01G385600.1	Wheat	nucleus	61.24	96.93
TraesCS3A01G352900.1	Wheat	nucleus	60.85	96.32
OQU87808	Sorghum	nucleus	52.71	82.42
Os01t0834400-02	Rice	nucleus	55.81	80.9
GSMUA_Achr11P...	Banana	nucleus	35.66	70.23
Zm00001d042968_P002	Maize	extracellular, nucleus	50.78	68.95
GSMUA_Achr5P28380_001	Banana	nucleus	36.82	68.35
HORVU1Hr1G071620.5	Barley	nucleus, plastid	62.79	64.29
HORVU5Hr1G004870.1	Barley	nucleus	25.19	56.03
HORVU7Hr1G119940.1	Barley	nucleus	27.91	55.81
KRH17618	Soybean	plastid	24.42	55.75
HORVU3Hr1G047250.1	Barley	nucleus	29.07	54.35
HORVU7Hr1G082430.1	Barley	nucleus	24.81	52.03
HORVU7Hr1G105460.1	Barley	nucleus	32.95	49.13
HORVU7Hr1G105500.6	Barley	nucleus	34.88	48.65
HORVU1Hr1G090450.9	Barley	nucleus	31.01	48.48
HORVU3Hr1G098500.1	Barley	nucleus	27.13	38.25
HORVU2Hr1G032320.1	Barley	nucleus	32.56	37.5
HORVU2Hr1G087460.1	Barley	nucleus	31.78	32.93
HORVU3Hr1G098490.1	Barley	cytosol, mitochondrion, nucleus, plastid	20.54	30.81
HORVU6Hr1G072110.1	Barley	nucleus	24.42	26.03
HORVU6Hr1G072140.1	Barley	cytosol	12.79	20.25
HORVU7Hr1G043520.1	Barley	nucleus	22.87	18.5
HORVU3Hr1G097680.4	Barley	cytosol, mitochondrion, nucleus	14.34	12.05

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	UniProt:A0A287M420	InterPro:CBFA_NFYB_domain	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	GO:GO:0046982	EnsemblPlantsGene:HORVU3Hr1G087390	EnsemblPlants:HORVU3Hr1G087390.1	InterPro:Histone-fold
InterPro:IPR009072	PFAM:PF00808	PRINTS:PR00615	ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF37
SUPFAM:SSF47113	InterPro:Transcrpt_fac_NFYB/HAP3_CS	UniParc:UPI000B47636E	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:+:621114775..621117530

Molecular Weight (calculated)

27776.2 Da

IEP (calculated)

10.158

GRAVY (calculated)

-0.446

Length

258 amino acids

Sequence
(BLAST)

001: AVLIARAGGP PALLRPHPQR PLLSLFPTDE RPGSVVFPIA PARAASPSPA SDLPFPTPPR STNHRLLLPP FSLSLPSAPP PARARAFFIR VSRRRMADDD
101: SGSPRGGGGG GVREQDRFLP IANISRIMKK AVPANGKIAK DAKETLQECV SEFISFVTSE ASDKCQKEKR KTINGDDLLW AMATLGFEEY VDPLKIYLQK
201: YRDGDSKLTS KSGDGSVKKD IIGAHGGATS SNAQVMVQHG AYAQGMGYMQ PQYHNGDT

Best Arabidopsis Sequence Match ( AT2G38880.7 )
(BLAST)

001: MADTPSSPAG DGGESGGSVR EQDRYLPIAN ISRIMKKALP PNGKIGKDAK DTVQECVSEF ISFITSEASD KCQKEKRKTV NGDDLLWAMA TLGFEDYLEP
101: LKIYLARYRE GDNKGSGKSG DGSNRDAGGG VSGEEMPSW

Arabidopsis Description

NF-YB1Nuclear factor Y, subunit B1 [Source:UniProtKB/TrEMBL;Acc:F4ITZ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.