Factsheet for Zm00001d042968_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87808	Sorghum	nucleus	80.0	92.12
TraesCS3A01G352900.1	Wheat	nucleus	70.0	81.6
TraesCS3B01G385600.1	Wheat	nucleus	70.0	81.6
TraesCS3D01G347000.1	Wheat	nucleus	70.0	81.6
Os01t0834400-02	Rice	nucleus	68.42	73.03
GSMUA_Achr11P...	Banana	nucleus	48.95	70.99
Zm00001d038397_P005	Maize	nucleus	66.32	70.79
Zm00001d010574_P001	Maize	nucleus	67.37	68.45
GSMUA_Achr5P28380_001	Banana	nucleus	50.0	68.35
Zm00001d001775_P001	Maize	nucleus	31.05	64.84
Zm00001d009636_P001	Maize	nucleus	40.53	59.69
KRH17618	Soybean	plastid	34.21	57.52
Zm00001d039957_P001	Maize	nucleus	37.89	52.17
HORVU3Hr1G087390.1	Barley	mitochondrion	68.95	50.78
Zm00001d030151_P001	Maize	mitochondrion	19.47	45.12
Zm00001d011915_P001	Maize	nucleus	38.95	43.27
Zm00001d006813_P001	Maize	nucleus	44.74	41.46
Zm00001d042196_P001	Maize	nucleus	38.42	40.78
Zm00001d022099_P001	Maize	nucleus	45.26	40.57
Zm00001d029505_P001	Maize	nucleus	45.79	39.19
Zm00001d049485_P001	Maize	nucleus	46.32	33.98
Zm00001d042197_P001	Maize	plastid	29.47	33.73
Zm00001d051697_P001	Maize	nucleus	35.79	25.76
Zm00001d017898_P001	Maize	nucleus	36.84	25.18
Zm00001d045772_P001	Maize	nucleus, plastid	31.58	22.9
Zm00001d019101_P001	Maize	nucleus	20.0	19.29
Zm00001d017899_P001	Maize	nucleus	20.0	19.29
Zm00001d012445_P001	Maize	nucleus	46.84	16.86
Zm00001d050242_P002	Maize	plastid	24.21	15.49
Zm00001d032328_P005	Maize	extracellular, plastid	23.68	14.95

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	UniProt:A0A1D6N7R4	InterPro:CBFA_NFYB_domain	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072	ProteinID:ONM36628.1
PFAM:PF00808	PRINTS:PR00615	ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF37	SUPFAM:SSF47113
InterPro:Transcrpt_fac_NFYB/HAP3_CS	UniParc:UPI000843FC87	EnsemblPlantsGene:Zm00001d042968	EnsemblPlants:Zm00001d042968_P002	EnsemblPlants:Zm00001d042968_T002	SEG:seg

Description

CCAAT-HAP3-transcription factor 31Nuclear transcription factor Y subunit B-8

Coordinates

chr3:+:185334729..185336816

Molecular Weight (calculated)

20606.6 Da

IEP (calculated)

7.971

GRAVY (calculated)

-0.485

Length

190 amino acids

Sequence
(BLAST)

001: MADDGGSHEG SGGGGGVREQ DRFLPIANIS RIMKKAVPAN GKIAKDAKET LQECVSEFIS FVTSEASDKC QKEKRKTING DDLLWAMATL GFEEYVEPLK
101: IYLQKYKEME GDSKLSTKAG EGSVKKDAIS PHGGTSSSSN QLVQHGVYNQ GMGYMQPQLG KSLHCLPCVL AENRRHLQRV LISAMAASQV

Best Arabidopsis Sequence Match ( AT3G53340.1 )
(BLAST)

001: MAESQTGGGG GGSHESGGDQ SPRSLNVREQ DRFLPIANIS RIMKRGLPLN GKIAKDAKET MQECVSEFIS FVTSEASDKC QREKRKTING DDLLWAMATL
101: GFEDYIDPLK VYLMRYREME GDTKGSGKGG ESSAKRDGQP SQVSQFSQVP QQGSFSQGPY GNSQGSNMMV QMPGTE

Arabidopsis Description

NFYB10Nuclear transcription factor Y subunit B-10 [Source:UniProtKB/Swiss-Prot;Acc:Q67XJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.