Factsheet for Zm00001d001775_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009636_P001	Maize	nucleus	96.7	68.22
Zm00001d039957_P001	Maize	nucleus	90.11	59.42
Zm00001d030151_P001	Maize	mitochondrion	50.55	56.1
OQU78466	Sorghum	nucleus	76.92	51.09
TraesCS1B01G442000.1	Wheat	nucleus	75.82	50.74
TraesCS1D01G419500.1	Wheat	nucleus	75.82	50.74
TraesCS1A01G411700.1	Wheat	nucleus	74.73	50.0
HORVU5Hr1G004870.1	Barley	nucleus	61.54	48.28
Os05t0573500-01	Rice	nucleus	75.82	48.25
HORVU7Hr1G082430.1	Barley	nucleus	63.74	47.15
HORVU7Hr1G119940.1	Barley	nucleus	63.74	44.96
HORVU3Hr1G047250.1	Barley	nucleus	67.03	44.2
HORVU1Hr1G090450.9	Barley	nucleus	69.23	38.18
GSMUA_Achr8P28050_001	Banana	nucleus	63.74	36.94
Zm00001d042968_P002	Maize	extracellular, nucleus	64.84	31.05
Zm00001d038397_P005	Maize	nucleus	60.44	30.9
Zm00001d010574_P001	Maize	nucleus	59.34	28.88
Zm00001d011915_P001	Maize	nucleus	49.45	26.32
Zm00001d042196_P001	Maize	nucleus	49.45	25.14
Zm00001d006813_P001	Maize	nucleus	54.95	24.39
Zm00001d022099_P001	Maize	nucleus	54.95	23.58
Zm00001d029505_P001	Maize	nucleus	54.95	22.52
Zm00001d042197_P001	Maize	plastid	38.46	21.08
Zm00001d049485_P001	Maize	nucleus	56.04	19.69
Zm00001d051697_P001	Maize	nucleus	48.35	16.67
Zm00001d017898_P001	Maize	nucleus	49.45	16.19
Zm00001d045772_P001	Maize	nucleus, plastid	42.86	14.89
Zm00001d017899_P001	Maize	nucleus	29.67	13.71
Zm00001d019101_P001	Maize	nucleus	26.37	12.18
Zm00001d012445_P001	Maize	nucleus	50.55	8.71
Zm00001d050242_P002	Maize	plastid	27.47	8.42
Zm00001d032328_P005	Maize	extracellular, plastid	26.37	7.97

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	UniProt:A0A1D6DSP3	InterPro:CBFA_NFYB_domain	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072	ProteinID:ONM11927.1
PFAM:PF00808	PRINTS:PR00615	ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF49	SUPFAM:SSF47113
InterPro:Transcrpt_fac_NFYB/HAP3_CS	UniParc:UPI000220B31B	EnsemblPlantsGene:Zm00001d001775	EnsemblPlants:Zm00001d001775_P001	EnsemblPlants:Zm00001d001775_T001	:

Description

CCAAT-HAP3-transcription factor 32Nuclear transcription factor Y subunit B-8

Coordinates

chr2:-:546551..547601

Molecular Weight (calculated)

10395.1 Da

IEP (calculated)

4.913

GRAVY (calculated)

-0.807

Length

91 amino acids

Sequence
(BLAST)

1: MRRAVTENGK IARDARESIQ ECVSEFISFI TSEASDKCVK ERRKTINDDD IIWSLGTLGF EEYVEPLKIY LNNYQEGDIK GSKSSDQNGK K

Best Arabidopsis Sequence Match ( AT2G38880.7 )
(BLAST)

001: MADTPSSPAG DGGESGGSVR EQDRYLPIAN ISRIMKKALP PNGKIGKDAK DTVQECVSEF ISFITSEASD KCQKEKRKTV NGDDLLWAMA TLGFEDYLEP
101: LKIYLARYRE GDNKGSGKSG DGSNRDAGGG VSGEEMPSW

Arabidopsis Description

NF-YB1Nuclear factor Y, subunit B1 [Source:UniProtKB/TrEMBL;Acc:F4ITZ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.