Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d001775_P001 | Maize | nucleus | 47.15 | 63.74 |
| HORVU3Hr1G047250.1 | Barley | nucleus | 65.04 | 57.97 |
| HORVU7Hr1G119940.1 | Barley | nucleus | 60.16 | 57.36 |
| TraesCS1D01G419500.1 | Wheat | nucleus | 61.79 | 55.88 |
| TraesCS1B01G442000.1 | Wheat | nucleus | 61.79 | 55.88 |
| TraesCS1A01G411700.1 | Wheat | nucleus | 61.79 | 55.88 |
| HORVU5Hr1G004870.1 | Barley | nucleus | 51.22 | 54.31 |
| OQU78466 | Sorghum | nucleus | 57.72 | 51.82 |
| Zm00001d009636_P001 | Maize | nucleus | 52.85 | 50.39 |
| Os05t0573500-01 | Rice | nucleus | 58.54 | 50.35 |
| Zm00001d039957_P001 | Maize | nucleus | 53.66 | 47.83 |
| HORVU1Hr1G090450.9 | Barley | nucleus | 62.6 | 46.67 |
| GSMUA_Achr8P28050_001 | Banana | nucleus | 52.85 | 41.4 |
| HORVU7Hr1G105460.1 | Barley | nucleus | 47.97 | 34.1 |
| HORVU7Hr1G105500.6 | Barley | nucleus | 47.97 | 31.89 |
| HORVU3Hr1G098500.1 | Barley | nucleus | 40.65 | 27.32 |
| HORVU2Hr1G032320.1 | Barley | nucleus | 46.34 | 25.45 |
| HORVU1Hr1G071620.5 | Barley | nucleus, plastid | 52.03 | 25.4 |
| HORVU6Hr1G072140.1 | Barley | cytosol | 33.33 | 25.15 |
| HORVU3Hr1G087390.1 | Barley | mitochondrion | 52.03 | 24.81 |
| HORVU3Hr1G098490.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 33.33 | 23.84 |
| HORVU2Hr1G087460.1 | Barley | nucleus | 45.53 | 22.49 |
| HORVU6Hr1G072110.1 | Barley | nucleus | 40.65 | 20.66 |
| HORVU7Hr1G043520.1 | Barley | nucleus | 38.21 | 14.73 |
| HORVU3Hr1G097680.4 | Barley | cytosol, mitochondrion, nucleus | 19.51 | 7.82 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | UniProt:A0A287X3K3 | InterPro:CBFA_NFYB_domain | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046982 | EnsemblPlantsGene:HORVU7Hr1G082430 | EnsemblPlants:HORVU7Hr1G082430.1 | InterPro:Histone-fold |
| InterPro:IPR009072 | PFAM:PF00808 | PRINTS:PR00615 | ScanProsite:PS00685 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF49 |
| SUPFAM:SSF47113 | InterPro:Transcrpt_fac_NFYB/HAP3_CS | UniParc:UPI000B4875B0 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr7H:+:495012868..495013565
Molecular Weight (calculated)
10882.1 Da
IEP (calculated)
8.024
GRAVY (calculated)
-0.359
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXIA NIGRIMQRGV PEKGKIAKDT KETIQECVSE FISFITSEAS DKCMKENRKT INDNDLIWSM GTLGFEDYVE
101: PLKVYLKLYR ERTTPSSLTR ISC
101: PLKVYLKLYR ERTTPSSLTR ISC
001: MAESQTGGGG GGSHESGGDQ SPRSLNVREQ DRFLPIANIS RIMKRGLPLN GKIAKDAKET MQECVSEFIS FVTSEASDKC QREKRKTING DDLLWAMATL
101: GFEDYIDPLK VYLMRYREVC STSD
101: GFEDYIDPLK VYLMRYREVC STSD
Arabidopsis Description
NFYB10Nuclear transcription factor Y subunit B-10 [Source:UniProtKB/Swiss-Prot;Acc:Q67XJ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.