Factsheet for TraesCS1A01G411700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G442000.1	Wheat	nucleus	98.53	98.53
TraesCS1D01G419500.1	Wheat	nucleus	97.06	97.06
Os05t0573500-01	Rice	nucleus	80.15	76.22
HORVU7Hr1G119940.1	Barley	nucleus	72.06	75.97
HORVU5Hr1G004870.1	Barley	nucleus	64.71	75.86
Zm00001d001775_P001	Maize	nucleus	50.0	74.73
Zm00001d009636_P001	Maize	nucleus	70.59	74.42
HORVU3Hr1G047250.1	Barley	nucleus	72.06	71.01
OQU78466	Sorghum	nucleus	66.18	65.69
HORVU1Hr1G090450.9	Barley	nucleus	76.47	63.03
HORVU7Hr1G082430.1	Barley	nucleus	55.88	61.79
Zm00001d039957_P001	Maize	nucleus	61.76	60.87
GSMUA_Achr8P28050_001	Banana	nucleus	65.44	56.69
TraesCS7A01G486400.1	Wheat	cytosol	38.97	50.0
TraesCS3A01G352900.1	Wheat	nucleus	58.82	49.08
TraesCS1A01G288500.3	Wheat	nucleus	58.82	43.96
TraesCS3A01G026900.1	Wheat	nucleus	53.68	36.14
TraesCS3A01G457100.1	Wheat	nucleus	49.26	35.26
TraesCS2A01G173500.1	Wheat	nucleus	54.41	32.74
TraesCS3A01G457000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	38.24	30.23
TraesCS2A01G359400.1	Wheat	nucleus	52.94	28.92
TraesCS6A01G287400.2	Wheat	cytosol, mitochondrion, nucleus, plastid	33.09	26.32
TraesCS7A01G214800.1	Wheat	cytosol	37.5	24.64
TraesCS6A01G287300.1	Wheat	nucleus	44.12	24.39
TraesCS7A01G214900.1	Wheat	nucleus	38.24	19.55
TraesCS7A01G214600.1	Wheat	nucleus	37.5	19.17
TraesCS7A01G214700.1	Wheat	nucleus	37.5	18.61
TraesCS7A01G214500.1	Wheat	nucleus	37.5	17.11
TraesCS3A01G450700.1	Wheat	cytosol, mitochondrion, nucleus	22.79	10.65

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	InterPro:CBFA_NFYB_domain	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072	PFAM:PF00808	PRINTS:PR00615
ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF49	SUPFAM:SSF47113	EnsemblPlantsGene:TraesCS1A01G411700	EnsemblPlants:TraesCS1A01G411700.1
InterPro:Transcrpt_fac_NFYB/HAP3_CS	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:572335012..572336556

Molecular Weight (calculated)

14933.8 Da

IEP (calculated)

5.359

GRAVY (calculated)

-0.597

Length

136 amino acids

Sequence
(BLAST)

001: MSEAVGTPES SGAKEQERFL PIANIGRIMR RGVPENGKIA KDAKESIQEC VSEFISFITS EASDKCMKEK RKTINGDDLI WSMGTLGFED YVEPLKLYLK
101: LYREMEGDTS KGSKSEQAAK KVGALNGQPG SSFNGM

Best Arabidopsis Sequence Match ( AT2G37060.1 )
(BLAST)

001: MAESQAKSPG GCGSHESGGD QSPRSLHVRE QDRFLPIANI SRIMKRGLPA NGKIAKDAKE IVQECVSEFI SFVTSEASDK CQREKRKTIN GDDLLWAMAT
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD

Arabidopsis Description

NFYB8Nuclear transcription factor Y subunit B-8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYK4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.