Factsheet for Zm00001d009636_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d001775_P001	Maize	nucleus	68.22	96.7
Zm00001d039957_P001	Maize	nucleus	81.4	76.09
TraesCS1B01G442000.1	Wheat	nucleus	75.97	72.06
TraesCS1D01G419500.1	Wheat	nucleus	75.97	72.06
TraesCS1A01G411700.1	Wheat	nucleus	74.42	70.59
Os05t0573500-01	Rice	nucleus	76.74	69.23
OQU78466	Sorghum	nucleus	72.87	68.61
HORVU5Hr1G004870.1	Barley	nucleus	56.59	62.93
HORVU7Hr1G119940.1	Barley	nucleus	62.79	62.79
HORVU3Hr1G047250.1	Barley	nucleus	65.89	61.59
Zm00001d030151_P001	Maize	mitochondrion	37.21	58.54
HORVU7Hr1G082430.1	Barley	nucleus	50.39	52.85
GSMUA_Achr8P28050_001	Banana	nucleus	63.57	52.23
HORVU1Hr1G090450.9	Barley	nucleus	65.89	51.52
Zm00001d038397_P005	Maize	nucleus	59.69	43.26
Zm00001d042968_P002	Maize	extracellular, nucleus	59.69	40.53
Zm00001d010574_P001	Maize	nucleus	58.14	40.11
Zm00001d011915_P001	Maize	nucleus	46.51	35.09
Zm00001d042196_P001	Maize	nucleus	48.06	34.64
Zm00001d006813_P001	Maize	nucleus	51.16	32.2
Zm00001d022099_P001	Maize	nucleus	51.16	31.13
Zm00001d029505_P001	Maize	nucleus	51.16	29.73
Zm00001d042197_P001	Maize	plastid	35.66	27.71
Zm00001d049485_P001	Maize	nucleus	53.49	26.64
Zm00001d051697_P001	Maize	nucleus	44.19	21.59
Zm00001d017898_P001	Maize	nucleus	45.74	21.22
Zm00001d045772_P001	Maize	nucleus, plastid	39.53	19.47
Zm00001d017899_P001	Maize	nucleus	28.68	18.78
Zm00001d019101_P001	Maize	nucleus	25.58	16.75
Zm00001d012445_P001	Maize	nucleus	49.61	12.12
Zm00001d050242_P002	Maize	plastid	24.81	10.77
Zm00001d032328_P005	Maize	extracellular, plastid	24.03	10.3

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	UniProt:A0A1D6FKV4	ProteinID:AQK92329.1	InterPro:CBFA_NFYB_domain	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072
PFAM:PF00808	PRINTS:PR00615	ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF49	SUPFAM:SSF47113
InterPro:Transcrpt_fac_NFYB/HAP3_CS	UniParc:UPI0008455CBF	EnsemblPlantsGene:Zm00001d009636	EnsemblPlants:Zm00001d009636_P001	EnsemblPlants:Zm00001d009636_T001	:

Description

Nuclear transcription factor Y subunit B-8

Coordinates

chr8:+:73979708..73980561

Molecular Weight (calculated)

14362.9 Da

IEP (calculated)

5.028

GRAVY (calculated)

-0.700

Length

129 amino acids

Sequence
(BLAST)

001: MSEVEANAGG RGKEQDRFLP IANIGRIMRR AVPENGKIAR DARESIQECV SEFISFITSE ASDKCVKERR KTINGDDIIW SLGTLGFEEY VEPLKIYLNN
101: YQEGDTKGSK SSDQNGKKQM LLNGELGSS

Best Arabidopsis Sequence Match ( AT2G37060.1 )
(BLAST)

001: MAESQAKSPG GCGSHESGGD QSPRSLHVRE QDRFLPIANI SRIMKRGLPA NGKIAKDAKE IVQECVSEFI SFVTSEASDK CQREKRKTIN GDDLLWAMAT
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD

Arabidopsis Description

NFYB8Nuclear transcription factor Y subunit B-8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYK4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.