Factsheet for Zm00001d006813_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57816	Soybean	cytosol	31.71	83.33
Zm00001d022099_P001	Maize	nucleus	85.37	82.55
KRH66225	Soybean	cytosol	42.93	81.48
EER99684	Sorghum	nucleus	85.85	80.73
KRG88870	Soybean	cytosol	40.0	75.93
HORVU2Hr1G032320.1	Barley	nucleus	77.56	70.98
TraesCS2B01G199800.1	Wheat	nucleus	77.56	70.67
TraesCS2D01G180700.1	Wheat	nucleus	77.07	70.22
TraesCS2A01G173500.1	Wheat	nucleus	76.59	69.47
Zm00001d029505_P001	Maize	nucleus	69.76	64.41
Zm00001d001775_P001	Maize	nucleus	24.39	54.95
Zm00001d038397_P005	Maize	nucleus	45.85	52.81
Zm00001d009636_P001	Maize	nucleus	32.2	51.16
Zm00001d010574_P001	Maize	nucleus	45.85	50.27
Zm00001d042968_P002	Maize	extracellular, nucleus	41.46	44.74
Zm00001d011915_P001	Maize	nucleus	37.07	44.44
Zm00001d039957_P001	Maize	nucleus	29.76	44.2
Zm00001d042196_P001	Maize	nucleus	37.56	43.02
Zm00001d030151_P001	Maize	mitochondrion	16.59	41.46
Zm00001d049485_P001	Maize	nucleus	48.78	38.61
Zm00001d042197_P001	Maize	plastid	28.29	34.94
Zm00001d051697_P001	Maize	nucleus	39.02	30.3
Zm00001d017898_P001	Maize	nucleus	39.51	29.14
Zm00001d045772_P001	Maize	nucleus, plastid	31.22	24.43
Zm00001d019101_P001	Maize	nucleus	19.51	20.3
Zm00001d017899_P001	Maize	nucleus	19.51	20.3
Zm00001d012445_P001	Maize	nucleus	39.51	15.34
Zm00001d050242_P002	Maize	plastid	19.51	13.47
Zm00001d032328_P005	Maize	extracellular, plastid	18.54	12.62

Protein Annotations

Gene3D:1.10.20.10	EntrezGene:103647828	MapMan:15.5.51.2	UniProt:A0A1D6F122	InterPro:CBFA_NFYB_domain	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072
ProteinID:ONM25170.1	PFAM:PF00808	PRINTS:PR00615	ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF87
SUPFAM:SSF47113	InterPro:Transcrpt_fac_NFYB/HAP3_CS	UniParc:UPI000221E488	EnsemblPlantsGene:Zm00001d006813	EnsemblPlants:Zm00001d006813_P001	EnsemblPlants:Zm00001d006813_T001
SEG:seg	:	:	:	:	:

Description

CCAAT-DR1-transcription factor 6Nuclear transcription factor Y subunit B-2

Coordinates

chr2:+:217201427..217202044

Molecular Weight (calculated)

21815.6 Da

IEP (calculated)

6.237

GRAVY (calculated)

-0.666

Length

205 amino acids

Sequence
(BLAST)

001: MPDSDNDESG GPSNADFSSP REQDRFLPIA NVSRIMKKAL PANAKISKDG KETVQECVSE FISFITGEAS DKCQREKRKT INGDDLLWAM TTLGFEDYVE
101: PLKLYLHKFR ELEGDKAAAG SQPPPPPSST HNGAGVPVGY GMYGAGGGSG MIMMMGQPMY PPAASSGYSQ QPPHHQMSMG GKGGAYGHCD GSSSSPSGLR
201: RHDGL

Best Arabidopsis Sequence Match ( AT4G14540.1 )
(BLAST)

001: MADSDNDSGG HKDGGNASTR EQDRFLPIAN VSRIMKKALP ANAKISKDAK ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYVEP
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S

Arabidopsis Description

NFYB3Nuclear transcription factor Y subunit B-3 [Source:UniProtKB/Swiss-Prot;Acc:O23310]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.