Factsheet for HORVU2Hr1G032320.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G199800.1	Wheat	nucleus	96.43	96.0
TraesCS2D01G180700.1	Wheat	nucleus	96.43	96.0
TraesCS2A01G173500.1	Wheat	nucleus	95.09	94.25
KRH57816	Soybean	cytosol	28.57	82.05
KRH66225	Soybean	cytosol	38.84	80.56
EER99684	Sorghum	nucleus	77.68	79.82
Zm00001d022099_P001	Maize	nucleus	75.45	79.72
Zm00001d006813_P001	Maize	nucleus	70.98	77.56
KRG88870	Soybean	cytosol	36.16	75.0
HORVU7Hr1G105460.1	Barley	nucleus	55.8	72.25
HORVU7Hr1G105500.6	Barley	nucleus	55.8	67.57
HORVU5Hr1G004870.1	Barley	nucleus	28.57	55.17
HORVU7Hr1G119940.1	Barley	nucleus	29.91	51.94
HORVU3Hr1G047250.1	Barley	nucleus	30.8	50.0
HORVU7Hr1G082430.1	Barley	nucleus	25.45	46.34
HORVU1Hr1G090450.9	Barley	nucleus	33.48	45.45
HORVU3Hr1G098500.1	Barley	nucleus	36.16	44.26
HORVU2Hr1G087460.1	Barley	nucleus	45.98	41.37
HORVU1Hr1G071620.5	Barley	nucleus, plastid	41.96	37.3
HORVU3Hr1G098490.1	Barley	cytosol, mitochondrion, nucleus, plastid	27.68	36.05
HORVU6Hr1G072110.1	Barley	nucleus	36.61	33.88
HORVU3Hr1G087390.1	Barley	mitochondrion	37.5	32.56
HORVU7Hr1G043520.1	Barley	nucleus	33.04	23.2
HORVU6Hr1G072140.1	Barley	cytosol	13.84	19.02
HORVU3Hr1G097680.4	Barley	cytosol, mitochondrion, nucleus	16.96	12.38

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	InterPro:CBFA_NFYB_domain	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	GO:GO:0046982	EnsemblPlantsGene:HORVU2Hr1G032320	EnsemblPlants:HORVU2Hr1G032320.1	InterPro:Histone-fold	InterPro:IPR009072
UniProt:M0YM16	PFAM:PF00808	PRINTS:PR00615	ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF87
SUPFAM:SSF47113	InterPro:Transcrpt_fac_NFYB/HAP3_CS	UniParc:UPI000259CED5	SEG:seg	:	:

Description

NF-YB1 [Source:UniProtKB/TrEMBL;Acc:M0YM16]

Coordinates

chrchr2H:+:124882875..124884114

Molecular Weight (calculated)

23309.1 Da

IEP (calculated)

6.018

GRAVY (calculated)

-0.732

Length

224 amino acids

Sequence
(BLAST)

001: MPDSDNDSGG PSNADFSSPK EQDRFLPIAN VSRIMKKALP ANAKISKDAK ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYMEP
101: LKLYLHKFRE LEGEKAIGAG AGGAAPSPGG SSSQQRESTP RNNGGGGEAG GYGGMYGSAG AGGGGGMFMM MGQPMYGSPP AAGYQHPQHH HQMMTGGQGG
201: YGYGDAGTGG GSSSSSGFGR QDRT

Best Arabidopsis Sequence Match ( AT4G14540.1 )
(BLAST)

001: MADSDNDSGG HKDGGNASTR EQDRFLPIAN VSRIMKKALP ANAKISKDAK ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYVEP
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S

Arabidopsis Description

NFYB3Nuclear transcription factor Y subunit B-3 [Source:UniProtKB/Swiss-Prot;Acc:O23310]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.