Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G119940.1 | Barley | nucleus | 85.51 | 91.47 |
| HORVU5Hr1G004870.1 | Barley | nucleus | 75.36 | 89.66 |
| TraesCS1D01G419500.1 | Wheat | nucleus | 72.46 | 73.53 |
| TraesCS1B01G442000.1 | Wheat | nucleus | 71.74 | 72.79 |
| TraesCS1A01G411700.1 | Wheat | nucleus | 71.01 | 72.06 |
| Zm00001d001775_P001 | Maize | nucleus | 44.2 | 67.03 |
| HORVU1Hr1G090450.9 | Barley | nucleus | 78.99 | 66.06 |
| Zm00001d009636_P001 | Maize | nucleus | 61.59 | 65.89 |
| HORVU7Hr1G082430.1 | Barley | nucleus | 57.97 | 65.04 |
| Os05t0573500-01 | Rice | nucleus | 66.67 | 64.34 |
| OQU78466 | Sorghum | nucleus | 63.04 | 63.5 |
| Zm00001d039957_P001 | Maize | nucleus | 62.32 | 62.32 |
| GSMUA_Achr8P28050_001 | Banana | nucleus | 63.04 | 55.41 |
| HORVU7Hr1G105460.1 | Barley | nucleus | 50.0 | 39.88 |
| HORVU7Hr1G105500.6 | Barley | nucleus | 50.72 | 37.84 |
| HORVU3Hr1G098500.1 | Barley | nucleus | 47.1 | 35.52 |
| HORVU2Hr1G032320.1 | Barley | nucleus | 50.0 | 30.8 |
| HORVU1Hr1G071620.5 | Barley | nucleus, plastid | 54.35 | 29.76 |
| HORVU3Hr1G098490.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 36.23 | 29.07 |
| HORVU3Hr1G087390.1 | Barley | mitochondrion | 54.35 | 29.07 |
| HORVU2Hr1G087460.1 | Barley | nucleus | 50.0 | 27.71 |
| HORVU6Hr1G072110.1 | Barley | nucleus | 41.3 | 23.55 |
| HORVU6Hr1G072140.1 | Barley | cytosol | 21.74 | 18.4 |
| HORVU7Hr1G043520.1 | Barley | nucleus | 40.58 | 17.55 |
| HORVU3Hr1G097680.4 | Barley | cytosol, mitochondrion, nucleus | 21.01 | 9.45 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | UniProt:A0A287KYN8 | InterPro:CBFA_NFYB_domain | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046982 | EnsemblPlantsGene:HORVU3Hr1G047250 | EnsemblPlants:HORVU3Hr1G047250.1 | InterPro:Histone-fold |
| InterPro:IPR009072 | PFAM:PF00808 | PRINTS:PR00615 | ScanProsite:PS00685 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF49 |
| SUPFAM:SSF47113 | InterPro:Transcrpt_fac_NFYB/HAP3_CS | UniParc:UPI000B464F32 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr3H:+:321101982..321102702
Molecular Weight (calculated)
15216.3 Da
IEP (calculated)
9.157
GRAVY (calculated)
-0.417
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: ERAAMSEVVG TPESGGGGGV KEQERFLPIA NIGRIMQRGV PEKGKISKDA KESIQECVSE FISFITSEAS DKCMKDKRKT INGDDLIWSI GTLGFEDYVE
101: PLKLYLNLYR ERTTLSSLTR IKVKRMPSRA ASGNSVLA
101: PLKLYLNLYR ERTTLSSLTR IKVKRMPSRA ASGNSVLA
001: MAESQAKSPG GCGSHESGGD QSPRSLHVRE QDRFLPIANI SRIMKRGLPA NGKIAKDAKE IVQECVSEFI SFVTSEASDK CQREKRKTIN GDDLLWAMAT
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
Arabidopsis Description
NFYB8Nuclear transcription factor Y subunit B-8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.