Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G180700.1 | Wheat | nucleus | 99.11 | 99.11 |
| TraesCS2A01G173500.1 | Wheat | nucleus | 98.67 | 98.23 |
| HORVU2Hr1G032320.1 | Barley | nucleus | 96.0 | 96.43 |
| KRH57816 | Soybean | cytosol | 28.44 | 82.05 |
| KRH66225 | Soybean | cytosol | 38.67 | 80.56 |
| EER99684 | Sorghum | nucleus | 77.33 | 79.82 |
| Zm00001d022099_P001 | Maize | nucleus | 74.67 | 79.25 |
| Zm00001d006813_P001 | Maize | nucleus | 70.67 | 77.56 |
| KRG88870 | Soybean | cytosol | 36.0 | 75.0 |
| TraesCS3B01G017400.1 | Wheat | nucleus | 64.44 | 68.4 |
| TraesCS7B01G501400.1 | Wheat | cytoskeleton, cytosol, nucleus | 28.89 | 57.02 |
| TraesCS1B01G442000.1 | Wheat | nucleus | 32.89 | 54.41 |
| TraesCS1B01G297900.2 | Wheat | nucleus | 42.67 | 52.75 |
| TraesCS3B01G385600.1 | Wheat | nucleus | 37.78 | 52.15 |
| TraesCS5B01G454900.1 | Wheat | cytoskeleton, cytosol, nucleus | 27.56 | 50.82 |
| TraesCS2B01G378700.1 | Wheat | nucleus | 45.78 | 41.37 |
| TraesCS6B01G316600.1 | Wheat | nucleus | 37.33 | 34.15 |
| TraesCS3B01G452700.1 | Wheat | cytosol | 17.78 | 31.01 |
| TraesCS6B01G316700.1 | Wheat | cytosol, nucleus, plastid | 18.67 | 25.77 |
| TraesCS7B01G121900.1 | Wheat | nucleus | 31.11 | 25.0 |
| TraesCS7B01G121800.1 | Wheat | nucleus | 30.67 | 23.0 |
| TraesCS3B01G487800.1 | Wheat | cytosol, mitochondrion, nucleus | 18.22 | 13.85 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | InterPro:CBFA_NFYB_domain | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | PFAM:PF00808 | PRINTS:PR00615 |
| ScanProsite:PS00685 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF87 | SUPFAM:SSF47113 | EnsemblPlantsGene:TraesCS2B01G199800 | EnsemblPlants:TraesCS2B01G199800.1 |
| InterPro:Transcrpt_fac_NFYB/HAP3_CS | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:178338316..178338993
Molecular Weight (calculated)
23302.1 Da
IEP (calculated)
6.018
GRAVY (calculated)
-0.686
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDSDNDSGG PSNADFSSPK EQDRFLPIAN VSRIMKKALP ANAKISKDAK ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYMEP
101: LKLYLHKFRE LEGEKAVGAG GVGALPSPGG SGSQQRESTP RNNGGGGEAG GYGGMYGGAG AGGGGGGMFM MMGQPMYGSP PAAGYQHPQH HHQMMTGGQG
201: GYGYGDAGAG GGSSSSSGFG RQDRA
101: LKLYLHKFRE LEGEKAVGAG GVGALPSPGG SGSQQRESTP RNNGGGGEAG GYGGMYGGAG AGGGGGGMFM MMGQPMYGSP PAAGYQHPQH HHQMMTGGQG
201: GYGYGDAGAG GGSSSSSGFG RQDRA
001: MADSDNDSGG HKDGGNASTR EQDRFLPIAN VSRIMKKALP ANAKISKDAK ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYVEP
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S
Arabidopsis Description
NFYB3Nuclear transcription factor Y subunit B-3 [Source:UniProtKB/Swiss-Prot;Acc:O23310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.