Factsheet for TraesCS7B01G121900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G214800.1	Wheat	cytosol	69.29	93.72
TraesCS7A01G214700.1	Wheat	nucleus	91.43	93.43
TraesCS7A01G214600.1	Wheat	nucleus	86.43	90.98
TraesCS7D01G216800.1	Wheat	nucleus	96.07	90.57
TraesCS7A01G214900.1	Wheat	nucleus	77.14	81.2
TraesCS7B01G121800.1	Wheat	nucleus	86.43	80.67
HORVU7Hr1G043520.1	Barley	nucleus	82.14	72.1
Os06t0285200-01	Rice	nucleus	46.07	51.6
OQU76250	Sorghum	nucleus	41.79	44.83
TraesCS6B01G316600.1	Wheat	nucleus	39.29	44.72
Zm00001d045772_P001	Maize	nucleus, plastid	39.64	42.37
TraesCS1B01G442000.1	Wheat	nucleus	18.57	38.24
TraesCS3B01G385600.1	Wheat	nucleus	22.14	38.04
TraesCS3B01G017400.1	Wheat	nucleus	25.71	33.96
TraesCS1B01G297900.2	Wheat	nucleus	21.79	33.52
TraesCS7B01G501400.1	Wheat	cytoskeleton, cytosol, nucleus	13.21	32.46
TraesCS5B01G454900.1	Wheat	cytoskeleton, cytosol, nucleus	13.93	31.97
TraesCS2B01G199800.1	Wheat	nucleus	25.0	31.11
TraesCS6B01G316700.1	Wheat	cytosol, nucleus, plastid	17.86	30.67
PGSC0003DMT400057379	Potato	nucleus	18.93	30.64
Solyc07g065570.1.1	Tomato	nucleus	20.0	29.79
Solyc07g065580.1.1	Tomato	nucleus	18.21	28.65
TraesCS2B01G378700.1	Wheat	nucleus	25.0	28.11
KRH70381	Soybean	cytosol	17.5	21.68
TraesCS3B01G452700.1	Wheat	cytosol	9.29	20.16
KRH49798	Soybean	cytosol, golgi, nucleus	16.07	19.48
TraesCS3B01G487800.1	Wheat	cytosol, mitochondrion, nucleus	13.93	13.18

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	InterPro:CBFA_NFYB_domain	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072	PFAM:PF00808	PRINTS:PR00615
ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF86	SUPFAM:SSF47113	EnsemblPlantsGene:TraesCS7B01G121900	EnsemblPlants:TraesCS7B01G121900.1
InterPro:Transcrpt_fac_NFYB/HAP3_CS	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:143054895..143055737

Molecular Weight (calculated)

29717.9 Da

IEP (calculated)

5.002

GRAVY (calculated)

-0.455

Length

280 amino acids

Sequence
(BLAST)

001: MENDGVPNGP AAPAPTQGTP VVREQDRLMP IANVIRIMRR ALPAHAKISD DAKEAIQECV SEFISFVTGE ANERCRMQHR KTVNAEDIVW ALNRLGFDDY
101: VVPLSVFLHR MRDPEAGTGG AAAGDSRAVT SAPPRAAPPV IHAVPLQAQR PMYAPPAPVQ VENQMQRPVY APPAPVQVQM QRGIYGPRAP VHGYAVGMAP
201: VRANVGGQYQ VFGGERVMAQ QYYGYGYEEG AYGAGSSNGG AAIGDEESSS NGVPAPGEGT GEPEPEPAAE ESHDKPVQSG

Best Arabidopsis Sequence Match ( AT1G21970.1 )
(BLAST)

001: MERGAPFSHY QLPKSISELN LDQHSNNPTP MTSSVVVAGA GDKNNGIVVQ QQPPCVAREQ DQYMPIANVI RIMRKTLPSH AKISDDAKET IQECVSEYIS
101: FVTGEANERC QREQRKTITA EDILWAMSKL GFDNYVDPLT VFINRYREIE TDRGSALRGE PPSLRQTYGG NGIGFHGPSH GLPPPGPYGY GMLDQSMVMG
201: GGRYYQNGSS GQDESSVGGG SSSSINGMPA FDHYGQYK

Arabidopsis Description

NFYB9Nuclear transcription factor Y subunit B-9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFD8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.