Factsheet for Zm00001d045772_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76250	Sorghum	nucleus	72.14	72.41
TraesCS7A01G214800.1	Wheat	cytosol	37.02	46.86
Os06t0285200-01	Rice	nucleus	43.13	45.2
Zm00001d001775_P001	Maize	nucleus	14.89	42.86
TraesCS7B01G121900.1	Wheat	nucleus	42.37	39.64
Zm00001d009636_P001	Maize	nucleus	19.47	39.53
TraesCS7A01G214700.1	Wheat	nucleus	41.22	39.42
Zm00001d039957_P001	Maize	nucleus	20.23	38.41
TraesCS7A01G214900.1	Wheat	nucleus	38.55	37.97
TraesCS7A01G214600.1	Wheat	nucleus	37.79	37.22
TraesCS7D01G216600.1	Wheat	nucleus	41.6	37.2
TraesCS7A01G214500.1	Wheat	nucleus	41.98	36.91
TraesCS7B01G121800.1	Wheat	nucleus	41.98	36.67
TraesCS7D01G216800.1	Wheat	nucleus	40.84	36.03
HORVU7Hr1G043520.1	Barley	nucleus	43.13	35.42
Zm00001d051697_P001	Maize	nucleus	35.5	35.23
Zm00001d011915_P001	Maize	nucleus	22.52	34.5
Zm00001d017898_P001	Maize	nucleus	36.26	34.17
Zm00001d038397_P005	Maize	nucleus	22.52	33.15
Zm00001d042196_P001	Maize	nucleus	22.52	32.96
Zm00001d042197_P001	Maize	plastid	20.61	32.53
Zm00001d042968_P002	Maize	extracellular, nucleus	22.9	31.58
Zm00001d006813_P001	Maize	nucleus	24.43	31.22
Zm00001d010574_P001	Maize	nucleus	22.14	31.02
Zm00001d022099_P001	Maize	nucleus	24.43	30.19
PGSC0003DMT400057379	Potato	nucleus	19.08	28.9
Solyc07g065570.1.1	Tomato	nucleus	20.61	28.72
Solyc07g065580.1.1	Tomato	nucleus	19.47	28.65
Zm00001d029505_P001	Maize	nucleus	24.05	28.38
Zm00001d030151_P001	Maize	mitochondrion	8.78	28.05
Zm00001d049485_P001	Maize	nucleus	24.81	25.1
KRH70381	Soybean	cytosol	20.23	23.45
Zm00001d017899_P001	Maize	nucleus	16.03	21.32
KRH49798	Soybean	cytosol, golgi, nucleus	17.18	19.48
Zm00001d019101_P001	Maize	nucleus	14.12	18.78
Zm00001d050242_P002	Maize	plastid	15.27	13.47
Zm00001d032328_P005	Maize	extracellular, plastid	14.89	12.96
Zm00001d012445_P001	Maize	nucleus	21.37	10.61

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	ProteinID:AQL03145.1	InterPro:CBFA_NFYB_domain	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072	UniProt:K7V8D5
PFAM:PF00808	PRINTS:PR00615	ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF86	SUPFAM:SSF47113
InterPro:Transcrpt_fac_NFYB/HAP3_CS	UniParc:UPI000152A53F	EnsemblPlantsGene:Zm00001d045772	EnsemblPlants:Zm00001d045772_P001	EnsemblPlants:Zm00001d045772_T001	SEG:seg

Description

CCAAT-DR1-transcription factor 12 CCAAT-DR1-transcription factor 12

Coordinates

chr9:+:38367392..38368180

Molecular Weight (calculated)

28039.8 Da

IEP (calculated)

6.670

GRAVY (calculated)

-0.652

Length

262 amino acids

Sequence
(BLAST)

001: MNNPQNPKAS APCTLPPELP KEAVATDEAP PPMGNNNNTE SATATMVREQ DRLMPVANVS RIMRQVLPPY AKISDDAKEV IQECVSEFIS FVTGEANERC
101: HTERRKTVTS EDIVWAMSRL GFDDYVAPLG AFLQRMRDDS DHGGEERGGP AGRGGSRRGS SSLPLHCPQQ MHHLHPAVCR RPHQSVSPAA GYAVRPVPRP
201: MPASGYRMQG GDHRSVGGVA PCSYGGALVQ AGGTQHVVGF HDDEASSSSE NPPPEGRAAG SN

Best Arabidopsis Sequence Match ( AT5G47670.2 )
(BLAST)

001: MAEGSMRPPE FNQPNKTSNG GEEECTVREQ DRFMPIANVI RIMRRILPAH AKISDDSKET IQECVSEYIS FITGEANERC QREQRKTITA EDVLWAMSKL
101: GFDDYIEPLT LYLHRYRELE GERGVSCSAG SVSMTNGLVV KRPNGTMTEY GAYGPVPGIH MAQYHYRHQN GFVFSGNEPN SKMSGSSSGA SGARVEVFPT
201: QQHKY

Arabidopsis Description

NFYB6Nuclear transcription factor Y subunit B-6 [Source:UniProtKB/Swiss-Prot;Acc:Q84W66]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.