Factsheet for Zm00001d042197_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	peroxisome
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d008595_P001
Zm00001d009514_P001
Zm00001d020915_P002
Zm00001d032363_P001
Zm00001d034829_P001
Zm00001d046171_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G09030.1	Zm00001d008595_P001	AT3G59220.1	17322342
AT1G09030.1	Zm00001d009514_P001	AT3G59220.1	17322342
AT1G09030.1	Zm00001d020915_P002	AT3G59220.1	17322342
AT1G09030.1	Zm00001d032363_P001	AT3G59220.1	17322342
AT1G09030.1	Zm00001d034829_P001	AT3G59220.1	17322342
AT1G09030.1	Zm00001d046171_P001	AT3G59220.1	17322342

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88166	Sorghum	cytosol, mitochondrion, nucleus	80.12	91.1
TraesCS3A01G457000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	59.64	57.56
GSMUA_Achr8P21910_001	Banana	cytosol	40.36	56.78
TraesCS3D01G450000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	58.43	56.4
HORVU3Hr1G098490.1	Barley	cytosol, mitochondrion, nucleus, plastid	58.43	56.4
Bra018585.1-P	Field mustard	nucleus	37.35	46.97
CDX95014	Canola	nucleus	37.35	46.97
AT1G09030.1	Thale cress	nucleus	36.75	43.88
KRG92877	Soybean	nucleus	35.54	42.75
VIT_14s0060g02660.t01	Wine grape	nucleus	37.35	42.18
PGSC0003DMT400063671	Potato	nucleus	34.94	42.03
KRH33913	Soybean	nucleus	34.94	41.13
VIT_01s0010g01910.t01	Wine grape	cytosol	36.75	40.13
Solyc01g099320.2.1	Tomato	nucleus	34.94	39.73
VIT_01s0010g01940.t01	Wine grape	cytosol	36.14	39.47
Zm00001d011915_P001	Maize	nucleus	40.36	39.18
Zm00001d001775_P001	Maize	nucleus	21.08	38.46
Zm00001d042196_P001	Maize	nucleus	38.55	35.75
Zm00001d009636_P001	Maize	nucleus	27.71	35.66
Zm00001d038397_P005	Maize	nucleus	34.94	32.58
Zm00001d030151_P001	Maize	mitochondrion	15.06	30.49
Zm00001d039957_P001	Maize	nucleus	25.3	30.43
Zm00001d010574_P001	Maize	nucleus	33.73	29.95
Zm00001d042968_P002	Maize	extracellular, nucleus	33.73	29.47
Zm00001d022099_P001	Maize	nucleus	37.35	29.25
Zm00001d006813_P001	Maize	nucleus	34.94	28.29
Zm00001d029505_P001	Maize	nucleus	36.14	27.03
Zm00001d049485_P001	Maize	nucleus	38.55	24.71
Zm00001d017899_P001	Maize	nucleus	24.7	20.81
Zm00001d045772_P001	Maize	nucleus, plastid	32.53	20.61
Zm00001d051697_P001	Maize	nucleus	31.93	20.08
Zm00001d017898_P001	Maize	nucleus	31.93	19.06
Zm00001d019101_P001	Maize	nucleus	21.08	17.77
Zm00001d050242_P002	Maize	plastid	18.07	10.1
Zm00001d032328_P005	Maize	extracellular, plastid	17.47	9.63
Zm00001d012445_P001	Maize	nucleus	30.12	9.47

Protein Annotations

Gene3D:1.10.20.10	EntrezGene:101027253	MapMan:15.5.51.2	ProteinID:AIB04482.1	InterPro:CBFA_NFYB_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0046982	UniProt:H9B3R6	InterPro:Histone-fold	InterPro:IPR009072	EMBL:JN974244	ProteinID:ONM34786.1
PFAM:PF00808	PRINTS:PR00615	PANTHER:PTHR11064	PANTHER:PTHR11064:SF54	SUPFAM:SSF47113	UniParc:UPI000221077D
EnsemblPlantsGene:Zm00001d042197	EnsemblPlants:Zm00001d042197_P001	EnsemblPlants:Zm00001d042197_T001	:	:	:

Description

CCAAT-HAP3-transcription factor 33HAP3-like protein

Coordinates

chr3:+:155849692..155850192

Molecular Weight (calculated)

18492.5 Da

IEP (calculated)

7.672

GRAVY (calculated)

-0.877

Length

166 amino acids

Sequence
(BLAST)

001: MSHTSNFTGF SQLEHPQPQR NSRASSSTTH DANVRHDNNL LPIANVGRIM KDALPPQAKI SKHAKETIQE CTTEFVGFVT GEASERCRRE RRKTINGDDI
101: CHAMRSLGLD HYADAMRRYL QRYRETEELA AALNSGGGGH DGNAIQIDVR DELSIFKGSN QQGGRD

Best Arabidopsis Sequence Match ( AT2G47810.1 )
(BLAST)

001: MAGNYHSFQN PIPRYQNYNF GSSSSNHQHE HDGLVVVVED QQQEESMMVK EQDRLLPIAN VGRIMKNILP ANAKVSKEAK ETMQECVSEF ISFVTGEASD
101: KCHKEKRKTV NGDDICWAMA NLGFDDYAAQ LKKYLHRYRV LEGEKPNHHG KGGPKSSPDN

Arabidopsis Description

NFYB5NF-YB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VUG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.