Factsheet for Zm00001d012445_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	nucleus	13.64	54.96
GSMUA_Achr5P28380_001	Banana	nucleus	13.83	52.52
Zm00001d001775_P001	Maize	nucleus	8.71	50.55
Zm00001d009636_P001	Maize	nucleus	12.12	49.61
Zm00001d038397_P005	Maize	nucleus	16.29	48.31
Zm00001d042968_P002	Maize	extracellular, nucleus	16.86	46.84
Zm00001d010574_P001	Maize	nucleus	16.29	45.99
KRH17618	Soybean	plastid	9.47	44.25
Zm00001d039957_P001	Maize	nucleus	11.55	44.2
Zm00001d022099_P001	Maize	nucleus	16.29	40.57
Zm00001d006813_P001	Maize	nucleus	15.34	39.51
Zm00001d029505_P001	Maize	nucleus	15.34	36.49
Zm00001d030151_P001	Maize	mitochondrion	5.49	35.37
Zm00001d011915_P001	Maize	nucleus	11.36	35.09
Zm00001d042196_P001	Maize	nucleus	11.55	34.08
Zm00001d049485_P001	Maize	nucleus	15.15	30.89
Zm00001d042197_P001	Maize	plastid	9.47	30.12
Zm00001d051697_P001	Maize	nucleus	13.26	26.52
Zm00001d017898_P001	Maize	nucleus	13.64	25.9
Zm00001d045772_P001	Maize	nucleus, plastid	10.61	21.37
Zm00001d019101_P001	Maize	nucleus	7.95	21.32
Zm00001d017899_P001	Maize	nucleus	7.58	20.3
Zm00001d050242_P002	Maize	plastid	9.66	17.17
Zm00001d032328_P005	Maize	extracellular, plastid	9.28	16.28

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	UniProt:A0A1D6G8R8	ProteinID:AQK99542.1	InterPro:CBFA_NFYB_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072	PFAM:PF00808	PANTHER:PTHR11064	PANTHER:PTHR11064:SF37
SUPFAM:SSF47113	UniParc:UPI000842A407	EnsemblPlantsGene:Zm00001d012445	EnsemblPlants:Zm00001d012445_P001	EnsemblPlants:Zm00001d012445_T001	SEG:seg

Description

CCAAT-DR1-transcription factor 8Nuclear transcription factor Y subunit B-8

Coordinates

chr8:+:174626161..174634719

Molecular Weight (calculated)

59422.1 Da

IEP (calculated)

4.406

GRAVY (calculated)

-0.666

Length

528 amino acids

Sequence
(BLAST)

001: MADDSGSHEG GGGDDDVREQ DMFLPITSIT RIMKKAVPAN AKITKDAKEI MQYCVSEFIF FVTSEAREKS KKEERKRINV DDLLWSVDTA GFEYVELLRI
101: CLQKYREGDS NKVSTKAGEG SLNKDAVSTH GGTSNSSNQH GVYNQEMVPP QHGVNNKEMD DMSPQLVHHG VYNLEMDNML SQLDQHEVYN QGMDDMPAHL
201: VQHGVYNQGI CDMTPQLVQH GVYNQGMSDM PPKHGVYNQA MNDMPTQLVQ HGVYNQEMDD MLPQLVQHGV YNQGMSDMSP QLVQHGGYNQ EMDDMTPQLV
301: PHGVYNQGMS DMLPQLVQHG VHNQEMDDMP PQLVQHGVYN QEINDMQPQL VQHGLYNGEM DDMPPQLVQH GVDNQEMDDM PPHLVQHGVY NQEVDNMVPH
401: LVQHGVYNQG MSDMLPQLVP HGVYNQEMDN ITPQHGVYNQ GMDDMPPQLV QHGVYNQGMD DISPQLVQHG VCNQGMVDMQ LQFVQHGVCN QGMDDIPPQL
501: RDVNLLEDTG VNNLGPAFLR ECELCHSI

Best Arabidopsis Sequence Match ( AT2G38880.7 )
(BLAST)

001: MADTPSSPAG DGGESGGSVR EQDRYLPIAN ISRIMKKALP PNGKIGKDAK DTVQECVSEF ISFITSEASD KCQKEKRKTV NGDDLLWAMA TLGFEDYLEP
101: LKIYLARYRE GDNKGSGKSG DGSNRDAGGG VSGEEMPSW

Arabidopsis Description

NF-YB1Nuclear factor Y, subunit B1 [Source:UniProtKB/TrEMBL;Acc:F4ITZ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.