Factsheet for Zm00001d009514_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d042197_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59220.1	Zm00001d042197_P001	AT1G09030.1	17322342

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0094g00610.t01	Wine grape	cytosol	49.49	45.37
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	39.39	39.0
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	55.56	27.36
CDY17721	Canola	mitochondrion	53.54	27.04
PGSC0003DMT400031070	Potato	mitochondrion	61.62	21.18
Solyc09g098160.2.1	Tomato	mitochondrion	61.62	20.96
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	60.61	20.62
TraesCS4A01G336100.1	Wheat	nucleus	60.61	20.41
TraesCS5B01G535900.1	Wheat	plastid	60.61	20.41
TraesCS5D01G533400.1	Wheat	cytosol	60.61	20.41
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	60.61	20.41
TraesCS5D01G533500.1	Wheat	plastid	60.61	19.93
PGSC0003DMT400031088	Potato	cytosol	58.59	19.59
GSMUA_Achr3P02460_001	Banana	cytosol	57.58	19.32
GSMUA_Achr9P01680_001	Banana	cytosol	57.58	19.19
HORVU5Hr1G120790.2	Barley	cytosol	63.64	19.15
VIT_19s0090g01530.t01	Wine grape	cytosol	56.57	18.79
Zm00001d020915_P002	Maize	cytosol	54.55	18.24
Bra000289.1-P	Field mustard	cytosol	53.54	17.97
Zm00001d008595_P001	Maize	plastid	59.6	17.82
GSMUA_Achr10P...	Banana	cytosol	53.54	17.79
Solyc09g098180.2.1	Tomato	plastid	58.59	17.58
Bra004746.1-P	Field mustard	plastid	52.53	17.57
CDY55513	Canola	plastid	52.53	17.57
PGSC0003DMT400033425	Potato	mitochondrion	51.52	17.41
OQU90634	Sorghum	mitochondrion	62.63	17.37
KRH01821	Soybean	plastid	56.57	17.28
KRH14295	Soybean	cytosol	52.53	17.28
KRH73851	Soybean	cytoskeleton, cytosol, nucleus	52.53	17.28
KRH46866	Soybean	plastid	56.57	17.23
KRH46283	Soybean	mitochondrion	51.52	17.11
Solyc07g065160.2.1	Tomato	mitochondrion	51.52	17.11
PGSC0003DMT400057126	Potato	cytosol, mitochondrion, nucleus, plastid	51.52	17.11
Os03t0845000-01	Rice	plasma membrane	61.62	16.9
AT3G59260.1	Thale cress	cytosol	45.45	16.61
CDX83501	Canola	mitochondrion	53.54	16.56
CDY42802	Canola	mitochondrion	53.54	16.51
Zm00001d034829_P001	Maize	mitochondrion	62.63	16.36
CDY17946	Canola	mitochondrion	52.53	16.35
CDX67787	Canola	nucleus	44.44	16.24
TraesCS4A01G336200.2	Wheat	plastid	60.61	16.22
TraesCS5B01G536000.2	Wheat	plastid	60.61	16.22
HORVU5Hr1G120780.3	Barley	plastid	62.63	16.15
TraesCS5B01G535700.3	Wheat	plastid	59.6	15.99
TraesCS5D01G533100.1	Wheat	plastid	60.61	15.92
TraesCS5B01G535800.1	Wheat	plastid	59.6	15.86
Solyc12g014590.1.1	Tomato	mitochondrion	51.52	15.6
CDY06015	Canola	cytosol	44.44	15.49
AT1G50590.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	48.48	15.48
CDY22806	Canola	cytosol	47.47	15.11
CDY37125	Canola	cytosol	47.47	15.11
AT3G59220.1	Thale cress	cytosol	43.43	14.98
CDY00611	Canola	nucleus	43.43	14.88
Bra014547.1-P	Field mustard	nucleus	43.43	14.83
Bra018859.1-P	Field mustard	cytosol	46.46	14.79
CDX98356	Canola	cytosol	39.39	14.77
TraesCS4A01G335900.1	Wheat	plastid	43.43	14.63
CDY57498	Canola	cytosol	40.4	14.39
CDX89016	Canola	nucleus	41.41	14.14
AT2G43120.2	Thale cress	nucleus	52.53	13.98
HORVU5Hr1G120800.4	Barley	plastid	62.63	13.96
TraesCS4A01G336000.2	Wheat	nucleus	44.44	13.29
Zm00001d032363_P001	Maize	cytosol	48.48	12.8
CDY57499	Canola	cytoskeleton, cytosol, nucleus	39.39	12.62
KRG98621	Soybean	nucleus	23.23	10.13
CDY06016	Canola	cytosol	26.26	9.74
VIT_09s0096g00380.t01	Wine grape	nucleus	13.13	9.29
HORVU5Hr1G120810.1	Barley	plastid	22.22	8.84
Bra007437.1-P	Field mustard	cytosol	2.02	1.02
Bra007438.1-P	Field mustard	cytosol	1.01	0.54
Bra003367.1-P	Field mustard	cytosol	1.01	0.52

Protein Annotations

EnsemblPlants:Zm00001d009514_P001	EnsemblPlants:Zm00001d009514_T001	EnsemblPlantsGene:Zm00001d009514	Gene3D:2.60.120.10	InterPro:IPR014710	InterPro:Pirin_N_dom
InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903	PANTHER:PTHR13903:SF11	PFAM:PF02678	ProteinID:AQK92031.1
SUPFAM:SSF51182	UniParc:UPI0008445C10	UniProt:A0A1D6FJU3	MapMan:35.1	:	:

Description

Pirin-like protein 2

Coordinates

chr8:+:68470753..68471912

Molecular Weight (calculated)

10810.1 Da

IEP (calculated)

6.623

GRAVY (calculated)

0.064

Length

99 amino acids

Sequence
(BLAST)

1: MSGGADEEFM VLRAAVVACC LRPHLSLSIG VAVSKPAGFP DHPHRGFETL TYMLEGAFTH QDFVGHKGII RTWDVQWITT ERGIVHLEMP AGDGVHKGL

Best Arabidopsis Sequence Match ( AT2G43120.2 )
(BLAST)

001: MAHNQFKDSL DPLSSINRHT ESQHQNTSKI RLLPRKATKK KKREEKTTLK YMRAAINRAN SLGGLFSFRF IRNIKSMSSS TSQDFVSRPV IKKVFAKLQK
101: EGDGAVVRRG ISRSEQKLLD PFLMLDEFSV SPPAGFPDHP HRGFETVTYV LEGGITHQDF KGHKGTIYAG DVQWMTAGRG IIHSEMPEEE VNKGLQLWIN
201: LSSNEKMIEP NYQELSHSDI PKAEQNGVEV KVIAGESMGI QSPVYTRTPT MFLDFTLQPG AQIHQNVPES WNAFAYILES GEGGGVFSSS NSSPIPAHSV
301: VVFGPGNDGV SVWNKSSSKQ LRFVLIAGEP IGEPVVQYGP FVMNTQAEID MTIEDYHYGK NGFEMAKYWR SQ

Arabidopsis Description

RmlC-like cupins superfamily protein [Source:TAIR;Acc:AT2G43120]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.