CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46283	Soybean	mitochondrion	90.75	69.13
KRH73851	Soybean	cytoskeleton, cytosol, nucleus	83.7	63.12
KRH14295	Soybean	cytosol	83.7	63.12
VIT_19s0090g01530.t01	Wine grape	cytosol	74.01	56.38
PGSC0003DMT400033425	Potato	mitochondrion	71.81	55.63
GSMUA_Achr3P11020_001	Banana	cytosol	67.4	50.83
Solyc12g014590.1.1	Tomato	mitochondrion	69.6	48.32
Zm00001d020915_P002	Maize	cytosol	62.11	47.64
TraesCS5D01G270300.1	Wheat	cytosol	63.44	47.52
GSMUA_Achr3P02460_001	Banana	cytosol	61.67	47.46
EER96962	Sorghum	cytosol	61.23	47.28
Bra018859.1-P	Field mustard	cytosol	64.76	47.27
HORVU5Hr1G072760.2	Barley	mitochondrion	63.0	47.19
AT1G50590.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	64.32	47.1
CDY22806	Canola	cytosol	64.32	46.95
TraesCS5B01G261100.1	Wheat	mitochondrion	63.0	46.89
CDY37125	Canola	cytosol	63.88	46.62
TraesCS5A01G262700.1	Wheat	mitochondrion	64.32	46.5
TraesCS5B01G535900.1	Wheat	plastid	59.91	46.26
Os09t0484800-01	Rice	cytosol, mitochondrion	60.35	46.13
GSMUA_Achr10P...	Banana	cytosol	60.35	45.97
TraesCS5D01G533400.1	Wheat	cytosol	59.47	45.92
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	58.59	45.7
TraesCS4A01G336100.1	Wheat	nucleus	59.03	45.58
TraesCS5D01G533500.1	Wheat	plastid	59.47	44.85
TraesCS4A01G335900.1	Wheat	plastid	57.71	44.56
GSMUA_Achr9P01680_001	Banana	cytosol	57.71	44.11
KRH46866	Soybean	plastid	57.71	40.31
HORVU5Hr1G120790.2	Barley	cytosol	58.15	40.12
KRH01821	Soybean	plastid	56.83	39.81
Zm00001d008595_P001	Maize	plastid	56.83	38.97
Os03t0845000-01	Rice	plasma membrane	61.67	38.78
OQU90634	Sorghum	mitochondrion	59.91	38.1
TraesCS4A01G336200.2	Wheat	plastid	60.35	37.03
TraesCS5B01G536000.2	Wheat	plastid	59.91	36.76
TraesCS4A01G336000.2	Wheat	nucleus	52.86	36.25
TraesCS5B01G535700.3	Wheat	plastid	58.59	36.04
PGSC0003DMT400057126	Potato	cytosol, mitochondrion, nucleus, plastid	47.14	35.91
Solyc07g065160.2.1	Tomato	mitochondrion	47.14	35.91
TraesCS5B01G535800.1	Wheat	plastid	58.59	35.75
TraesCS5D01G533100.1	Wheat	plastid	57.71	34.75
Zm00001d034829_P001	Maize	mitochondrion	56.39	33.77
HORVU5Hr1G120810.1	Barley	plastid	37.0	33.73
HORVU5Hr1G120780.3	Barley	plastid	56.83	33.59
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	29.07	32.84
Os08t0364900-00	Rice	plastid	50.22	32.39
TraesCS1B01G420000.1	Wheat	plastid	51.1	32.22
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	18.06	31.54
TraesCS1D01G400000.1	Wheat	plastid	49.78	31.39
TraesCS1A01G391900.1	Wheat	plastid	49.34	30.94
HORVU5Hr1G120800.4	Barley	plastid	60.35	30.86
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	49.34	28.14
Zm00001d032363_P001	Maize	cytosol	45.81	27.73
EES14882	Sorghum	cytosol, plastid	44.49	26.72
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	10.13	23.23

Protein Annotations

EMBL:ACUP02010905	EnsemblPlants:KRG98621	EnsemblPlantsGene:GLYMA_18G085300	Gene3D:2.60.120.10	InterPro:IPR014710	InterPro:Pirin
InterPro:Pirin_C_dom	InterPro:Pirin_N_dom	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903	PANTHER:PTHR13903:SF5
PFAM:PF02678	PFAM:PF05726	PIRSF:PIRSF006232	ProteinID:KRG98621	ProteinID:KRG98621.1	SUPFAM:SSF51182
UniParc:UPI0006EE1830	UniProt:A0A0R0EY21	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:8405181..8409592

Molecular Weight (calculated)

25247.1 Da

IEP (calculated)

5.313

GRAVY (calculated)

-0.381

Length

227 amino acids

Sequence
(BLAST)

001: MHEDFEGHKG TIEAGDLQWM TAGRGIVHSE MPGAQGIHSK MPGAQGTQRG LQLWINLASK YKMIEPRYQE VLSKDIAEAE DDGIKVRVIA GEALGIKSPI
101: YTRTPTMFLD FTLKPGGHLQ QPIPKSWNAF VYVLEGEGIF GNMKSQPSNS HHILLLGAGD GLEAWNQSSK LLRFILVGAE PLGEPLVQFG PFVMNTQEEI
201: DQTIDDFENF ANGFEKARHW RSESQIN

Best Arabidopsis Sequence Match ( AT1G50590.1 )
(BLAST)

001: MPISEKSSAT NTRLVVKKLF ARQLHEGFGA VVRRSIGRFE FRYFDPFLVL DEFSVSAPAG FPDHPHRGFE TVTYMLEGEI LHEDCEGHKG VIREGGLQWM
101: TAGKGIVHSE MPSSNSNGIT HNKGLQLWIN LSSRQKLVEP SYQEIESKDI AETEKDGVRV RVIAGEWNGV KSKICTRTPT MYLDFTLSPG SRISQPIPLH
201: WNAFVYVLQG HGHFGDSKLQ HSAAAAHHLL VLGLGGDMLE AWNGSDSGLP LRFILVAGEP IGEPMVQFGP FVMNTQEEID ETIDDFENFR NGFEKARHWK
301: SQAASALGLF

Arabidopsis Description

Pirin-like protein At1g50590 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.