Factsheet for Bra018859.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22806	Canola	cytosol	98.39	98.39
CDY37125	Canola	cytosol	96.78	96.78
AT1G50590.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	87.46	87.74
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	29.58	70.77
PGSC0003DMT400033425	Potato	mitochondrion	65.92	69.97
KRH73851	Soybean	cytoskeleton, cytosol, nucleus	65.59	67.77
KRH14295	Soybean	cytosol	65.59	67.77
VIT_19s0090g01530.t01	Wine grape	cytosol	64.63	67.45
KRH46283	Soybean	mitochondrion	63.34	66.11
EER96962	Sorghum	cytosol	62.38	65.99
KRG98621	Soybean	nucleus	47.27	64.76
Zm00001d020915_P002	Maize	cytosol	61.41	64.53
Os09t0484800-01	Rice	cytosol, mitochondrion	61.41	64.31
GSMUA_Achr3P11020_001	Banana	cytosol	61.74	63.79
HORVU5Hr1G072760.2	Barley	mitochondrion	61.74	63.37
TraesCS5B01G261100.1	Wheat	mitochondrion	62.06	63.28
GSMUA_Achr3P02460_001	Banana	cytosol	59.81	63.05
TraesCS5D01G270300.1	Wheat	cytosol	61.09	62.71
GSMUA_Achr9P01680_001	Banana	cytosol	58.84	61.62
Solyc12g014590.1.1	Tomato	mitochondrion	64.31	61.16
TraesCS5A01G262700.1	Wheat	mitochondrion	61.74	61.15
GSMUA_Achr10P...	Banana	cytosol	58.2	60.74
TraesCS5B01G535900.1	Wheat	plastid	56.59	59.86
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	54.98	58.76
TraesCS4A01G336100.1	Wheat	nucleus	55.31	58.5
TraesCS5D01G533400.1	Wheat	cytosol	55.31	58.5
Bra000289.1-P	Field mustard	cytosol	54.34	57.29
TraesCS5D01G533500.1	Wheat	plastid	55.31	57.14
Bra004746.1-P	Field mustard	plastid	54.02	56.76
TraesCS4A01G335900.1	Wheat	plastid	49.52	52.38
Zm00001d008595_P001	Maize	plastid	55.63	52.27
HORVU5Hr1G120790.2	Barley	cytosol	54.98	51.98
Os03t0845000-01	Rice	plasma membrane	59.81	51.52
OQU90634	Sorghum	mitochondrion	57.23	49.86
PGSC0003DMT400057126	Potato	cytosol, mitochondrion, nucleus, plastid	46.3	48.32
Solyc07g065160.2.1	Tomato	mitochondrion	46.3	48.32
Bra014547.1-P	Field mustard	nucleus	44.69	47.93
TraesCS4A01G336000.2	Wheat	nucleus	50.48	47.43
TraesCS5B01G536000.2	Wheat	plastid	55.63	46.76
TraesCS4A01G336200.2	Wheat	plastid	55.31	46.49
Bra007438.1-P	Field mustard	cytosol	27.65	46.49
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	14.79	46.46
TraesCS5B01G535800.1	Wheat	plastid	55.31	46.24
TraesCS5B01G535700.3	Wheat	plastid	54.66	46.07
TraesCS5D01G533100.1	Wheat	plastid	55.31	45.62
Bra003367.1-P	Field mustard	cytosol	27.97	45.55
Bra007437.1-P	Field mustard	cytosol	28.62	45.41
Zm00001d034829_P001	Maize	mitochondrion	54.98	45.12
HORVU5Hr1G120780.3	Barley	plastid	55.31	44.79
Os08t0364900-00	Rice	plastid	45.34	40.06
TraesCS1B01G420000.1	Wheat	plastid	46.3	40.0
HORVU5Hr1G120800.4	Barley	plastid	55.95	39.19
TraesCS1A01G391900.1	Wheat	plastid	45.34	38.95
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	25.08	38.81
TraesCS1D01G400000.1	Wheat	plastid	44.69	38.61
HORVU5Hr1G120810.1	Barley	plastid	29.58	36.95
Zm00001d032363_P001	Maize	cytosol	43.41	36.0
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	44.69	34.92
EES14882	Sorghum	cytosol, plastid	42.44	34.92

Protein Annotations

EnsemblPlants:Bra018859.1	EnsemblPlants:Bra018859.1-P	EnsemblPlantsGene:Bra018859	Gene3D:2.60.120.10	InterPro:IPR014710	InterPro:Pirin
InterPro:Pirin_C_dom	InterPro:Pirin_N_dom	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903	PANTHER:PTHR13903:SF5
PFAM:PF02678	PFAM:PF05726	PIRSF:PIRSF006232	SUPFAM:SSF51182	UniParc:UPI000253EAE6	UniProt:M4DQR6
MapMan:35.1	:	:	:	:	:

Description

AT1G50590 (E=1e-163) | pirin, putative

Coordinates

chrA06:+:1582535..1584105

Molecular Weight (calculated)

34681.3 Da

IEP (calculated)

6.616

GRAVY (calculated)

-0.350

Length

311 amino acids

Sequence
(BLAST)

001: MMPISEEASG KKRLVVKKLF ARQQHEGFGA VVRRSIGRFE LRYFDPFLVL DEFSVTAPAG FPDHPHKGFE TVTYMLEGEI LHEDCEGHKG VIREGGLQWM
101: TAGKGIVHSE MPSSNGNGTT THNKGLQLWI NLSSKHKLVM PSYQEIESKD IAEAEKDGVR VRIIAGEWNG VKSKICTRTP TMYFDFTLSP GSKISQHIPL
201: HWNAFVYVLQ GHGHFGDAKS QHSTAAAHHM LILGLGGDRL EAWNGSDSGL PLRFILVGGE PIGEPVVQFG PFVMNTQEEI DQTIDDFENF TNGFEKARHW
301: KSQATSDLGF F

Best Arabidopsis Sequence Match ( AT1G50590.1 )
(BLAST)

001: MPISEKSSAT NTRLVVKKLF ARQLHEGFGA VVRRSIGRFE FRYFDPFLVL DEFSVSAPAG FPDHPHRGFE TVTYMLEGEI LHEDCEGHKG VIREGGLQWM
101: TAGKGIVHSE MPSSNSNGIT HNKGLQLWIN LSSRQKLVEP SYQEIESKDI AETEKDGVRV RVIAGEWNGV KSKICTRTPT MYLDFTLSPG SRISQPIPLH
201: WNAFVYVLQG HGHFGDSKLQ HSAAAAHHLL VLGLGGDMLE AWNGSDSGLP LRFILVAGEP IGEPMVQFGP FVMNTQEEID ETIDDFENFR NGFEKARHWK
301: SQAASALGLF

Arabidopsis Description

Pirin-like protein At1g50590 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.