Factsheet for Bra007438.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003367.1-P	Field mustard	cytosol	69.73	67.54
CDY06015	Canola	cytosol	98.92	64.44
Bra007437.1-P	Field mustard	cytosol	60.54	57.14
Bra000289.1-P	Field mustard	cytosol	62.16	38.98
Bra004746.1-P	Field mustard	plastid	60.54	37.84
Bra014547.1-P	Field mustard	nucleus	58.92	37.59
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	52.43	32.99
EER96962	Sorghum	cytosol	50.81	31.97
GSMUA_Achr3P11020_001	Banana	cytosol	51.35	31.56
PGSC0003DMT400031088	Potato	cytosol	50.27	31.42
Os09t0484800-01	Rice	cytosol, mitochondrion	50.27	31.31
Zm00001d020915_P002	Maize	cytosol	48.65	30.41
Solyc09g098160.2.1	Tomato	mitochondrion	47.57	30.24
PGSC0003DMT400031070	Potato	mitochondrion	47.03	30.21
GSMUA_Achr3P02460_001	Banana	cytosol	48.11	30.17
TraesCS5B01G535900.1	Wheat	plastid	46.49	29.25
KRH46866	Soybean	plastid	50.81	28.92
TraesCS4A01G335900.1	Wheat	plastid	45.95	28.91
TraesCS5D01G533400.1	Wheat	cytosol	45.95	28.91
KRH01821	Soybean	plastid	50.27	28.7
TraesCS4A01G336100.1	Wheat	nucleus	45.41	28.57
TraesCS5B01G261100.1	Wheat	mitochondrion	47.03	28.52
TraesCS5D01G533500.1	Wheat	plastid	45.95	28.24
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	44.32	28.18
HORVU5Hr1G072760.2	Barley	mitochondrion	45.95	28.05
TraesCS5D01G270300.1	Wheat	cytosol	45.95	28.05
Solyc09g098180.2.1	Tomato	plastid	49.73	27.88
GSMUA_Achr10P...	Banana	cytosol	44.86	27.85
Bra018859.1-P	Field mustard	cytosol	46.49	27.65
GSMUA_Achr9P01680_001	Banana	cytosol	44.32	27.61
Zm00001d008595_P001	Maize	plastid	48.65	27.19
TraesCS5A01G262700.1	Wheat	mitochondrion	45.95	27.07
HORVU5Hr1G120790.2	Barley	cytosol	47.03	26.44
Os03t0845000-01	Rice	plasma membrane	49.73	25.48
TraesCS4A01G336000.2	Wheat	nucleus	44.32	24.77
OQU90634	Sorghum	mitochondrion	47.57	24.65
Zm00001d034829_P001	Maize	mitochondrion	48.11	23.48
TraesCS5B01G536000.2	Wheat	plastid	46.49	23.24
TraesCS5B01G535700.3	Wheat	plastid	45.95	23.04
TraesCS4A01G336200.2	Wheat	plastid	45.95	22.97
TraesCS5B01G535800.1	Wheat	plastid	45.95	22.85
TraesCS5D01G533100.1	Wheat	plastid	45.95	22.55
TraesCS1B01G420000.1	Wheat	plastid	42.7	21.94
HORVU5Hr1G120780.3	Barley	plastid	45.41	21.88
TraesCS1A01G391900.1	Wheat	plastid	42.16	21.55
Os08t0364900-00	Rice	plastid	40.54	21.31
TraesCS1D01G400000.1	Wheat	plastid	41.08	21.11
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	42.16	19.6
HORVU5Hr1G120800.4	Barley	plastid	47.03	19.59
EES14882	Sorghum	cytosol, plastid	38.92	19.05
Zm00001d032363_P001	Maize	cytosol	37.3	18.4
HORVU5Hr1G120810.1	Barley	plastid	22.16	16.47
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	10.27	9.45
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	4.86	9.0
VIT_05s0094g00610.t01	Wine grape	cytosol	3.78	6.48
VIT_09s0096g00380.t01	Wine grape	nucleus	4.86	6.43
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	3.78	5.38
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	0.54	1.01

Protein Annotations

EnsemblPlants:Bra007438.1	EnsemblPlants:Bra007438.1-P	EnsemblPlantsGene:Bra007438	Gene3D:2.60.120.10	InterPro:IPR014710	InterPro:Pirin
InterPro:Pirin_C_dom	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903	PANTHER:PTHR13903:SF5	PFAM:PF05726
PIRSF:PIRSF006232	SUPFAM:SSF51182	UniParc:UPI0002542EBE	UniProt:M4CT95	MapMan:35.1	:

Description

AT3G59260 (E=5e-067) | pirin, putative

Coordinates

chrA09:+:29213342..29214713

Molecular Weight (calculated)

20524.3 Da

IEP (calculated)

4.438

GRAVY (calculated)

-0.163

Length

185 amino acids

Sequence
(BLAST)

001: MSSRQVVKKI FANFENSNDG VIRQGITKID PANVEISSSE MPVAYEEGVE VKVIAGVSMG VQSPFYTRIP MMFLDITLQP RSQTQQTIPE SWTAFAYVLD
101: GNEGVFGSSD SYAVQAHTLV VFGTGDEVSV WNTSNYRPLR FLLIAGEPIG ESVVQHGPFV MNTQAEIDRT IWDYRNGQNG FEMAK

Best Arabidopsis Sequence Match ( AT2G43120.1 )
(BLAST)

001: MRAAINRANS LGGLFSFRFI RNIKSMSSST SQDFVSRPVI KKVFAKLQKE GDGAVVRRGI SRSEQKLLDP FLMLDEFSVS PPAGFPDHPH RGFETVTYVL
101: EGGITHQDFK GHKGTIYAGD VQWMTAGRGI IHSEMPEEEV NKGLQLWINL SSNEKMIEPN YQELSHSDIP KAEQNGVEVK VIAGESMGIQ SPVYTRTPTM
201: FLDFTLQPGA QIHQNVPESW NAFAYILESG EGGGVFSSSN SSPIPAHSVV VFGPGNDGVS VWNKSSSKQL RFVLIAGEPI GEPVVQYGPF VMNTQAEIDM
301: TIEDYHYGKN GFEMAKYWRS Q

Arabidopsis Description

RmlC-like cupins superfamily protein [Source:TAIR;Acc:AT2G43120]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.