Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G533500.1 | Wheat | plastid | 70.36 | 84.39 |
| TraesCS5B01G535900.1 | Wheat | plastid | 68.7 | 84.35 |
| TraesCS4A01G336100.1 | Wheat | nucleus | 68.7 | 84.35 |
| TraesCS5D01G533400.1 | Wheat | cytosol | 68.42 | 84.01 |
| TraesCS5D01G533200.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 66.48 | 82.47 |
| TraesCS4A01G335900.1 | Wheat | plastid | 63.99 | 78.57 |
| GSMUA_Achr3P02460_001 | Banana | cytosol | 62.33 | 76.27 |
| VIT_05s0094g00610.t01 | Wine grape | cytosol | 22.44 | 75.0 |
| PGSC0003DMT400031088 | Potato | cytosol | 61.22 | 74.66 |
| Solyc09g098160.2.1 | Tomato | mitochondrion | 59.83 | 74.23 |
| HORVU5Hr1G120790.2 | Barley | cytosol | 67.31 | 73.86 |
| GSMUA_Achr10P... | Banana | cytosol | 60.94 | 73.83 |
| VIT_05s0062g01190.t01 | Wine grape | cytosol, nucleus, peroxisome | 60.11 | 73.81 |
| GSMUA_Achr9P01680_001 | Banana | cytosol | 60.39 | 73.4 |
| Zm00001d008595_P001 | Maize | plastid | 66.76 | 72.81 |
| PGSC0003DMT400031070 | Potato | mitochondrion | 57.89 | 72.57 |
| OQU90634 | Sorghum | mitochondrion | 70.36 | 71.15 |
| TraesCS5B01G536000.2 | Wheat | plastid | 71.19 | 69.46 |
| TraesCS4A01G336200.2 | Wheat | plastid | 70.64 | 68.92 |
| TraesCS4A01G336000.2 | Wheat | nucleus | 62.88 | 68.58 |
| VIT_19s0090g01530.t01 | Wine grape | cytosol | 56.23 | 68.12 |
| TraesCS5B01G535800.1 | Wheat | plastid | 70.08 | 68.01 |
| TraesCS5D01G533100.1 | Wheat | plastid | 70.36 | 67.37 |
| Solyc09g098180.2.1 | Tomato | plastid | 61.22 | 66.97 |
| PGSC0003DMT400033425 | Potato | mitochondrion | 53.74 | 66.21 |
| TraesCS5B01G535700.3 | Wheat | plastid | 67.59 | 66.12 |
| KRH14295 | Soybean | cytosol | 54.57 | 65.45 |
| Zm00001d034829_P001 | Maize | mitochondrion | 68.42 | 65.17 |
| KRH01821 | Soybean | plastid | 58.45 | 65.12 |
| VIT_09s0096g00130.t01 | Wine grape | cytosol, nucleus, plastid | 18.01 | 65.0 |
| KRH73851 | Soybean | cytoskeleton, cytosol, nucleus | 54.02 | 64.78 |
| KRH46866 | Soybean | plastid | 58.17 | 64.62 |
| HORVU5Hr1G120780.3 | Barley | plastid | 67.87 | 63.8 |
| KRH46283 | Soybean | mitochondrion | 52.63 | 63.76 |
| Os09t0484800-01 | Rice | cytosol, mitochondrion | 52.08 | 63.3 |
| CDY55513 | Canola | plastid | 51.8 | 63.18 |
| Bra004746.1-P | Field mustard | plastid | 51.8 | 63.18 |
| Bra000289.1-P | Field mustard | cytosol | 51.25 | 62.71 |
| CDY17721 | Canola | mitochondrion | 33.52 | 61.73 |
| KRG98621 | Soybean | nucleus | 38.78 | 61.67 |
| Zm00001d009514_P001 | Maize | cytosol, endoplasmic reticulum | 16.9 | 61.62 |
| CDY22806 | Canola | cytosol | 51.52 | 59.81 |
| Bra018859.1-P | Field mustard | cytosol | 51.52 | 59.81 |
| CDY17946 | Canola | mitochondrion | 52.63 | 59.75 |
| HORVU5Hr1G120800.4 | Barley | plastid | 72.85 | 59.23 |
| AT3G59220.1 | Thale cress | cytosol | 47.09 | 59.23 |
| CDY37125 | Canola | cytosol | 50.97 | 59.16 |
| CDX83501 | Canola | mitochondrion | 52.35 | 59.06 |
| AT1G50590.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 50.42 | 58.71 |
| CDY42802 | Canola | mitochondrion | 52.08 | 58.57 |
| Solyc12g014590.1.1 | Tomato | mitochondrion | 52.63 | 58.1 |
| CDX67787 | Canola | nucleus | 42.38 | 56.46 |
| AT3G59260.1 | Thale cress | cytosol | 42.11 | 56.09 |
| CDX98356 | Canola | cytosol | 40.44 | 55.3 |
| CDY06015 | Canola | cytosol | 43.49 | 55.28 |
| CDY57498 | Canola | cytosol | 41.83 | 54.32 |
| CDY06016 | Canola | cytosol | 39.61 | 53.56 |
| CDX89016 | Canola | nucleus | 42.38 | 52.76 |
| AT2G43120.2 | Thale cress | nucleus | 54.29 | 52.69 |
| Bra007437.1-P | Field mustard | cytosol | 28.53 | 52.55 |
| Bra014547.1-P | Field mustard | nucleus | 42.11 | 52.41 |
| HORVU5Hr1G120810.1 | Barley | plastid | 36.01 | 52.21 |
| CDY00611 | Canola | nucleus | 41.55 | 51.9 |
| CDY57499 | Canola | cytoskeleton, cytosol, nucleus | 44.32 | 51.78 |
| Zm00001d046171_P001 | Maize | endoplasmic reticulum, mitochondrion, nucleus, plastid | 28.81 | 51.74 |
| Os08t0364900-00 | Rice | plastid | 49.31 | 50.57 |
| Bra003367.1-P | Field mustard | cytosol | 26.59 | 50.26 |
| Bra007438.1-P | Field mustard | cytosol | 25.48 | 49.73 |
| Solyc07g065160.2.1 | Tomato | mitochondrion | 40.72 | 49.33 |
| PGSC0003DMT400057126 | Potato | cytosol, mitochondrion, nucleus, plastid | 40.44 | 48.99 |
| VIT_09s0096g00380.t01 | Wine grape | nucleus | 11.08 | 28.57 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | EntrezGene:4334762 | ProteinID:AAS07362.1 | ProteinID:ABF99861.1 | EMBL:AK105971 |
| ProteinID:BAF13790.1 | ProteinID:BAS87335.1 | ProteinID:EEE60287.1 | InterPro:IPR014710 | EnsemblPlantsGene:Os03g0845000 | EnsemblPlants:Os03t0845000-01 |
| PFAM:PF02678 | PFAM:PF05726 | PIRSF:PIRSF006232 | PANTHER:PTHR13903 | PANTHER:PTHR13903:SF5 | InterPro:Pirin |
| InterPro:Pirin_C_dom | InterPro:Pirin_N_dom | UniProt:Q75LB9 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SUPFAM:SSF51182 |
| UniParc:UPI000023948E | RefSeq:XP_015631161.1 | SEG:seg | : | : | : |
Description
Similar to Pirin-like protein. (Os03t0845000-01)
Coordinates
chr3:-:35524251..35526214
Molecular Weight (calculated)
39626.2 Da
IEP (calculated)
8.622
GRAVY (calculated)
-0.337
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTRSMMKFF SPSSSAIYTT LSSRLARINA TRHTPPPPPK SSRAARSLTS FLLIRATMSS SSSSSDAVAA AAAATFEKPR TVVKKLLAES QPEGDGATVR
101: RSIGRYELRN LDPFLMLDEF SVSKPAGFPD HPHRGFETVT YMLEGAFTHQ DFAGHKGTIG TGDVQWMTAG RGIVHSEMPA ADGVQKGLQL WINLSSKDKM
201: IEPRYQELMS KDISCAEKDG VEVKIIAGEA FGVRSPVYTR TPTMYMDFTM QPGSQLHQPI PEAWNAFVYI IDGEGVFGRE KASPATAHHC LVLGPGDGLS
301: VWNKSGEPLR FALVGGQPLN EPVVQHGPFV MNTRAEIQQA MEDYYYGRNG FEKARHWSST A
101: RSIGRYELRN LDPFLMLDEF SVSKPAGFPD HPHRGFETVT YMLEGAFTHQ DFAGHKGTIG TGDVQWMTAG RGIVHSEMPA ADGVQKGLQL WINLSSKDKM
201: IEPRYQELMS KDISCAEKDG VEVKIIAGEA FGVRSPVYTR TPTMYMDFTM QPGSQLHQPI PEAWNAFVYI IDGEGVFGRE KASPATAHHC LVLGPGDGLS
301: VWNKSGEPLR FALVGGQPLN EPVVQHGPFV MNTRAEIQQA MEDYYYGRNG FEKARHWSST A
001: MAHNQFKDSL DPLSSINRHT ESQHQNTSKI RLLPRKATKK KKREEKTTLK YMRAAINRAN SLGGLFSFRF IRNIKSMSSS TSQDFVSRPV IKKVFAKLQK
101: EGDGAVVRRG ISRSEQKLLD PFLMLDEFSV SPPAGFPDHP HRGFETVTYV LEGGITHQDF KGHKGTIYAG DVQWMTAGRG IIHSEMPEEE VNKGLQLWIN
201: LSSNEKMIEP NYQELSHSDI PKAEQNGVEV KVIAGESMGI QSPVYTRTPT MFLDFTLQPG AQIHQNVPES WNAFAYILES GEGGGVFSSS NSSPIPAHSV
301: VVFGPGNDGV SVWNKSSSKQ LRFVLIAGEP IGEPVVQYGP FVMNTQAEID MTIEDYHYGK NGFEMAKYWR SQ
101: EGDGAVVRRG ISRSEQKLLD PFLMLDEFSV SPPAGFPDHP HRGFETVTYV LEGGITHQDF KGHKGTIYAG DVQWMTAGRG IIHSEMPEEE VNKGLQLWIN
201: LSSNEKMIEP NYQELSHSDI PKAEQNGVEV KVIAGESMGI QSPVYTRTPT MFLDFTLQPG AQIHQNVPES WNAFAYILES GEGGGVFSSS NSSPIPAHSV
301: VVFGPGNDGV SVWNKSSSKQ LRFVLIAGEP IGEPVVQYGP FVMNTQAEID MTIEDYHYGK NGFEMAKYWR SQ
Arabidopsis Description
RmlC-like cupins superfamily protein [Source:TAIR;Acc:AT2G43120]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.