Factsheet for Bra000289.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004746.1-P	Field mustard	plastid	95.25	94.93
CDX83501	Canola	mitochondrion	98.64	90.94
CDY42802	Canola	mitochondrion	97.29	89.41
CDY17721	Canola	mitochondrion	56.61	85.2
AT2G43120.2	Thale cress	nucleus	92.54	73.39
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	72.2	72.45
VIT_05s0094g00610.t01	Wine grape	cytosol	25.76	70.37
PGSC0003DMT400031088	Potato	cytosol	69.15	68.92
PGSC0003DMT400031070	Potato	mitochondrion	64.41	65.97
Solyc09g098160.2.1	Tomato	mitochondrion	64.75	65.64
Bra014547.1-P	Field mustard	nucleus	64.41	65.52
KRH01821	Soybean	plastid	71.53	65.12
GSMUA_Achr9P01680_001	Banana	cytosol	65.08	64.65
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	28.47	64.62
KRH46866	Soybean	plastid	70.85	64.31
Bra007437.1-P	Field mustard	cytosol	42.71	64.29
Bra003367.1-P	Field mustard	cytosol	41.36	63.87
GSMUA_Achr10P...	Banana	cytosol	64.07	63.42
GSMUA_Achr3P11020_001	Banana	cytosol	64.07	62.79
GSMUA_Achr3P02460_001	Banana	cytosol	62.37	62.37
Os09t0484800-01	Rice	cytosol, mitochondrion	62.71	62.29
TraesCS5B01G535900.1	Wheat	plastid	62.03	62.24
Bra007438.1-P	Field mustard	cytosol	38.98	62.16
EER96962	Sorghum	cytosol	61.69	61.9
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	60.68	61.51
Solyc09g098180.2.1	Tomato	plastid	68.14	60.91
TraesCS5D01G533400.1	Wheat	cytosol	60.68	60.88
TraesCS5B01G261100.1	Wheat	mitochondrion	62.71	60.66
TraesCS4A01G336100.1	Wheat	nucleus	60.34	60.54
TraesCS5D01G270300.1	Wheat	cytosol	61.69	60.07
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	20.34	60.0
Zm00001d020915_P002	Maize	cytosol	60.0	59.8
HORVU5Hr1G072760.2	Barley	mitochondrion	61.36	59.74
TraesCS5D01G533500.1	Wheat	plastid	60.34	59.14
TraesCS5A01G262700.1	Wheat	mitochondrion	62.03	58.28
HORVU5Hr1G120790.2	Barley	cytosol	62.03	55.62
Zm00001d008595_P001	Maize	plastid	61.69	54.98
Bra018859.1-P	Field mustard	cytosol	57.29	54.34
TraesCS4A01G335900.1	Wheat	plastid	53.56	53.74
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	17.97	53.54
OQU90634	Sorghum	mitochondrion	63.05	52.1
Os03t0845000-01	Rice	plasma membrane	62.71	51.25
TraesCS4A01G336000.2	Wheat	nucleus	54.58	48.64
TraesCS4A01G336200.2	Wheat	plastid	60.68	48.38
TraesCS5B01G536000.2	Wheat	plastid	60.68	48.38
Zm00001d034829_P001	Maize	mitochondrion	62.03	48.28
TraesCS5B01G535700.3	Wheat	plastid	59.66	47.7
TraesCS5D01G533100.1	Wheat	plastid	60.68	47.48
TraesCS5B01G535800.1	Wheat	plastid	59.66	47.31
HORVU5Hr1G120780.3	Barley	plastid	61.02	46.88
Os08t0364900-00	Rice	plastid	52.88	44.32
TraesCS1B01G420000.1	Wheat	plastid	52.88	43.33
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	29.49	43.28
TraesCS1A01G391900.1	Wheat	plastid	52.2	42.54
TraesCS1D01G400000.1	Wheat	plastid	51.53	42.22
HORVU5Hr1G120800.4	Barley	plastid	61.36	40.77
EES14882	Sorghum	cytosol, plastid	49.15	38.36
Zm00001d032363_P001	Maize	cytosol	48.47	38.13
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	50.85	37.69
HORVU5Hr1G120810.1	Barley	plastid	30.51	36.14
VIT_09s0096g00380.t01	Wine grape	nucleus	12.54	26.43

Protein Annotations

EnsemblPlants:Bra000289.1	EnsemblPlants:Bra000289.1-P	EnsemblPlantsGene:Bra000289	Gene3D:2.60.120.10	InterPro:IPR014710	InterPro:Pirin
InterPro:Pirin_C_dom	InterPro:Pirin_N_dom	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903	PANTHER:PTHR13903:SF5
PFAM:PF02678	PFAM:PF05726	PIRSF:PIRSF006232	SEG:seg	SUPFAM:SSF51182	UniParc:UPI000253FCDA
UniProt:M4C7W1	MapMan:35.1	:	:	:	:

Description

AT2G43120 (E=7e-157) | pirin, putative

Coordinates

chrA03:+:10359174..10360650

Molecular Weight (calculated)

32590.4 Da

IEP (calculated)

5.816

GRAVY (calculated)

-0.360

Length

295 amino acids

Sequence
(BLAST)

001: MSSSSQSFVS RSVIKNVFAK LQREGDGAVV RRGISRSEQK LLDPFLMLDE FSVSPPAGFP DHPHRGFETV TYVLEGGITH QDFKGHKGTI YAGDVQWMTA
101: GRGIIHSEMP EEEVNKGLQL WINLSSNEKM IEPNYQELSS SDIPKADQNG VQVKVIAGES MGIQSPVYTR TPTMFLDFTL HPGAQFHQKV PESWNAFAYV
201: LESGEGGAVF GSSNSSPVSA HNVVVFGQGN DGVSVWNKSS SKKLRFVLIA GEPIGEPVVQ YGPFVMNTQA EIDMTIEDYH YSKNGFEMAK YWKSQ

Best Arabidopsis Sequence Match ( AT2G43120.2 )
(BLAST)

001: MAHNQFKDSL DPLSSINRHT ESQHQNTSKI RLLPRKATKK KKREEKTTLK YMRAAINRAN SLGGLFSFRF IRNIKSMSSS TSQDFVSRPV IKKVFAKLQK
101: EGDGAVVRRG ISRSEQKLLD PFLMLDEFSV SPPAGFPDHP HRGFETVTYV LEGGITHQDF KGHKGTIYAG DVQWMTAGRG IIHSEMPEEE VNKGLQLWIN
201: LSSNEKMIEP NYQELSHSDI PKAEQNGVEV KVIAGESMGI QSPVYTRTPT MFLDFTLQPG AQIHQNVPES WNAFAYILES GEGGGVFSSS NSSPIPAHSV
301: VVFGPGNDGV SVWNKSSSKQ LRFVLIAGEP IGEPVVQYGP FVMNTQAEID MTIEDYHYGK NGFEMAKYWR SQ

Arabidopsis Description

RmlC-like cupins superfamily protein [Source:TAIR;Acc:AT2G43120]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.