Factsheet for Os08t0364900-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G420000.1	Wheat	plastid	66.48	65.0
TraesCS1D01G400000.1	Wheat	plastid	65.34	63.89
TraesCS1A01G391900.1	Wheat	plastid	65.62	63.81
VIT_05s0094g00610.t01	Wine grape	cytosol	18.75	61.11
Zm00001d032363_P001	Maize	cytosol	64.49	60.53
EES14882	Sorghum	cytosol, plastid	64.49	60.05
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	63.35	56.03
PGSC0003DMT400031088	Potato	cytosol	44.6	53.04
Bra000289.1-P	Field mustard	cytosol	44.32	52.88
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	44.03	52.72
Solyc09g098160.2.1	Tomato	mitochondrion	43.47	52.58
PGSC0003DMT400031070	Potato	mitochondrion	42.61	52.08
Bra004746.1-P	Field mustard	plastid	43.75	52.03
CDY55513	Canola	plastid	43.47	51.69
VIT_19s0090g01530.t01	Wine grape	cytosol	43.75	51.68
CDX67787	Canola	nucleus	39.77	51.66
CDY17721	Canola	mitochondrion	28.69	51.53
Os09t0484800-01	Rice	cytosol, mitochondrion	43.47	51.52
KRH46283	Soybean	mitochondrion	42.9	50.67
CDX98356	Canola	cytosol	37.78	50.38
KRG98621	Soybean	nucleus	32.39	50.22
AT3G59220.1	Thale cress	cytosol	40.91	50.17
KRH73851	Soybean	cytoskeleton, cytosol, nucleus	42.61	49.83
KRH14295	Soybean	cytosol	42.33	49.5
CDY17946	Canola	mitochondrion	44.6	49.37
Os03t0845000-01	Rice	plasma membrane	50.57	49.31
PGSC0003DMT400033425	Potato	mitochondrion	40.91	49.15
CDX83501	Canola	mitochondrion	44.6	49.06
CDY42802	Canola	mitochondrion	44.6	48.91
AT3G59260.1	Thale cress	cytosol	37.5	48.71
Solyc09g098180.2.1	Tomato	plastid	45.17	48.18
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	13.64	48.0
CDY06015	Canola	cytosol	38.35	47.54
KRH01821	Soybean	plastid	43.47	47.22
CDY57498	Canola	cytosol	37.22	47.12
AT1G50590.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	41.19	46.77
KRH46866	Soybean	plastid	42.61	46.15
CDY37125	Canola	cytosol	40.62	45.98
CDY06016	Canola	cytosol	34.66	45.69
CDY22806	Canola	cytosol	40.34	45.66
Bra018859.1-P	Field mustard	cytosol	40.06	45.34
CDX89016	Canola	nucleus	36.93	44.83
CDY00611	Canola	nucleus	36.65	44.64
Bra014547.1-P	Field mustard	nucleus	36.65	44.48
CDY57499	Canola	cytoskeleton, cytosol, nucleus	38.92	44.34
Solyc12g014590.1.1	Tomato	mitochondrion	39.77	42.81
Bra003367.1-P	Field mustard	cytosol	22.73	41.88
Bra007437.1-P	Field mustard	cytosol	23.3	41.84
AT2G43120.2	Thale cress	nucleus	43.47	41.13
Bra007438.1-P	Field mustard	cytosol	21.31	40.54
PGSC0003DMT400057126	Potato	cytosol, mitochondrion, nucleus, plastid	33.52	39.6
Solyc07g065160.2.1	Tomato	mitochondrion	32.95	38.93
VIT_09s0096g00380.t01	Wine grape	nucleus	7.95	20.0

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:4345385	ProteinID:BAF23558.1	ProteinID:BAT05131.1	ncoils:Coil
InterPro:IPR014710	EnsemblPlantsGene:Os08g0364900	EnsemblPlants:Os08t0364900-00	PFAM:PF02678	PFAM:PF05726	PIRSF:PIRSF006232
PANTHER:PTHR13903	PANTHER:PTHR13903:SF11	InterPro:Pirin	InterPro:Pirin_C_dom	InterPro:Pirin_N_dom	UniProt:Q0J657
InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SUPFAM:SSF51182	UniParc:UPI0000DD94DE	RefSeq:XP_015650594.1	SEG:seg

Description

Similar to Pirin-like protein. (Os08t0364900-00)

Coordinates

chr8:+:16892349..16896395

Molecular Weight (calculated)

37264.9 Da

IEP (calculated)

6.447

GRAVY (calculated)

-0.212

Length

352 amino acids

Sequence
(BLAST)

001: MSAAACISSF PPPPMAAAAA PAPETTIDVF VVANHTPVTA AADKSSCEGD VVAGGGRTVR RPRAVARTLE CERRVVGEGF AVRRGIGRKE LDSLDPFISL
101: DEFEFSPPAG FHDHPHRGFE NVTYMLEGGF SYHDFSGHKG TINTGDVQWM TAGRGVVHAE MPGGHGVQRG INLWINLSSK DKMVEPRYQE LASHDIPAAE
201: RDGVSVKVIA GEALGARSPL QTRTPALCLD VAMRPGARLR APVPPGWSAC SYVIDGEAVF GDEAAAAGAH TCVVFGGGGD GVAARATERS AARFLLVAAR
301: PHGEAVVKDG PFVMNTREEV EQAREDYRNR RNGFEMAAGW SSDHVATAAA AH

Best Arabidopsis Sequence Match ( AT2G43120.2 )
(BLAST)

001: MAHNQFKDSL DPLSSINRHT ESQHQNTSKI RLLPRKATKK KKREEKTTLK YMRAAINRAN SLGGLFSFRF IRNIKSMSSS TSQDFVSRPV IKKVFAKLQK
101: EGDGAVVRRG ISRSEQKLLD PFLMLDEFSV SPPAGFPDHP HRGFETVTYV LEGGITHQDF KGHKGTIYAG DVQWMTAGRG IIHSEMPEEE VNKGLQLWIN
201: LSSNEKMIEP NYQELSHSDI PKAEQNGVEV KVIAGESMGI QSPVYTRTPT MFLDFTLQPG AQIHQNVPES WNAFAYILES GEGGGVFSSS NSSPIPAHSV
301: VVFGPGNDGV SVWNKSSSKQ LRFVLIAGEP IGEPVVQYGP FVMNTQAEID MTIEDYHYGK NGFEMAKYWR SQ

Arabidopsis Description

RmlC-like cupins superfamily protein [Source:TAIR;Acc:AT2G43120]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.