CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0094g00610.t01	Wine grape	cytosol	39.29	71.3
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	42.86	64.62
CDX83501	Canola	mitochondrion	99.49	60.94
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	30.1	59.0
Bra000289.1-P	Field mustard	cytosol	85.2	56.61
CDY55513	Canola	plastid	84.18	55.74
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	27.04	53.54
CDY42802	Canola	mitochondrion	85.71	52.34
CDY17946	Canola	mitochondrion	84.18	51.89
AT2G43120.2	Thale cress	nucleus	83.67	44.09
PGSC0003DMT400031088	Potato	cytosol	65.82	43.58
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	64.29	42.86
PGSC0003DMT400031070	Potato	mitochondrion	61.73	42.01
Solyc09g098160.2.1	Tomato	mitochondrion	62.24	41.92
KRH46866	Soybean	plastid	67.86	40.92
KRH01821	Soybean	plastid	67.35	40.74
TraesCS5B01G535900.1	Wheat	plastid	60.71	40.48
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	41.33	40.3
GSMUA_Achr9P01680_001	Banana	cytosol	60.71	40.07
GSMUA_Achr3P02460_001	Banana	cytosol	60.2	40.0
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	59.18	39.86
TraesCS5D01G533400.1	Wheat	cytosol	59.18	39.46
TraesCS4A01G336100.1	Wheat	nucleus	59.18	39.46
Solyc09g098180.2.1	Tomato	plastid	65.82	39.09
CDY00611	Canola	nucleus	57.14	38.75
GSMUA_Achr3P11020_001	Banana	cytosol	59.18	38.54
GSMUA_Achr10P...	Banana	cytosol	58.16	38.26
TraesCS5D01G533500.1	Wheat	plastid	58.16	37.87
CDY57499	Canola	cytoskeleton, cytosol, nucleus	58.67	37.22
EER96962	Sorghum	cytosol	55.61	37.07
Os09t0484800-01	Rice	cytosol, mitochondrion	56.12	37.04
CDX89016	Canola	nucleus	54.59	36.9
CDX67787	Canola	nucleus	50.51	36.53
CDY06015	Canola	cytosol	52.55	36.27
HORVU5Hr1G120790.2	Barley	cytosol	60.71	36.17
Zm00001d020915_P002	Maize	cytosol	54.59	36.15
CDY57498	Canola	cytosol	51.02	35.97
Zm00001d008595_P001	Maize	plastid	60.2	35.65
TraesCS5B01G261100.1	Wheat	mitochondrion	55.1	35.41
HORVU5Hr1G072760.2	Barley	mitochondrion	54.08	34.98
TraesCS5D01G270300.1	Wheat	cytosol	53.57	34.65
CDX98356	Canola	cytosol	46.43	34.47
CDY37125	Canola	cytosol	54.08	34.08
CDY22806	Canola	cytosol	54.08	34.08
CDY06016	Canola	cytosol	46.43	34.08
TraesCS5A01G262700.1	Wheat	mitochondrion	54.59	34.08
OQU90634	Sorghum	mitochondrion	61.22	33.61
Os03t0845000-01	Rice	plasma membrane	61.73	33.52
TraesCS4A01G335900.1	Wheat	plastid	50.0	33.33
TraesCS5B01G535700.3	Wheat	plastid	59.69	31.71
TraesCS4A01G336200.2	Wheat	plastid	59.69	31.62
TraesCS5B01G536000.2	Wheat	plastid	59.69	31.62
TraesCS5D01G533100.1	Wheat	plastid	60.71	31.57
TraesCS5B01G535800.1	Wheat	plastid	59.69	31.45
Zm00001d034829_P001	Maize	mitochondrion	60.2	31.13
HORVU5Hr1G120780.3	Barley	plastid	60.71	30.99
TraesCS4A01G336000.2	Wheat	nucleus	51.53	30.51
Os08t0364900-00	Rice	plastid	51.53	28.69
TraesCS1B01G420000.1	Wheat	plastid	51.02	27.78
HORVU5Hr1G120810.1	Barley	plastid	35.2	27.71
VIT_09s0096g00380.t01	Wine grape	nucleus	19.39	27.14
TraesCS1A01G391900.1	Wheat	plastid	50.0	27.07
TraesCS1D01G400000.1	Wheat	plastid	49.49	26.94
HORVU5Hr1G120800.4	Barley	plastid	59.18	26.13
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	50.0	24.62
Zm00001d032363_P001	Maize	cytosol	46.94	24.53
EES14882	Sorghum	cytosol, plastid	46.94	24.34

Protein Annotations

EnsemblPlants:CDY17721	EnsemblPlantsGene:GSBRNA2T00001946001	Gene3D:2.60.120.10	InterPro:IPR014710	InterPro:Pirin	InterPro:Pirin_N_dom
InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903	PANTHER:PTHR13903:SF5	PFAM:PF02678	PIRSF:PIRSF006232
ProteinID:CDY17721	ProteinID:CDY17721.1	SEG:seg	SUPFAM:SSF51182	UniParc:UPI0004EF4944	UniProt:A0A078FXG3
MapMan:35.1	:	:	:	:	:

Description

BnaA06g35400DBnaA06g35400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXG3]

Coordinates

chrLK032076:-:722335..723533

Molecular Weight (calculated)

21635.9 Da

IEP (calculated)

7.093

GRAVY (calculated)

-0.301

Length

196 amino acids

Sequence
(BLAST)

001: MRAAINKANT LRGLVTFGFI RNITSMSSSS QSFVSRSVIK KVFAKLQSEG DGAVVRRGIS RSEQMLLDPF LMLDEFSVSP PAGFPDHPHR GFETVTYVLE
101: GGITHQDFKG HKGTIYAGDV QWMTAGRGII HSEMPEEEVN KGLQLWINLS SNEKMIEPNY QELSSSDIPK AEQNGVQVKV IAGESMGIQS PVYTRT

Best Arabidopsis Sequence Match ( AT1G50590.1 )
(BLAST)

001: MPISEKSSAT NTRLVVKKLF ARQLHEGFGA VVRRSIGRFE FRYFDPFLVL DEFSVSAPAG FPDHPHRGFE TVTYMLEGEI LHEDCEGHKG VIREGGLQWM
101: TAGKGIVHSE MPSSNSNGIT HNKGLQLWIN LSSRQKLVEP SYQEIESKDI AETEKDGVRV RVIAGEWNGV KSKICTRTPT MYLDFTLSPG SRISQPIPLH
201: WNAFVYVLQG HGHFGDSKLQ HSAAAAHHLL VLGLGGDMLE AWNGSDSGLP LRFILVAGEP IGEPMVQFGP FVMNTQEEID ETIDDFENFR NGFEKARHWK
301: SQAASALGLF

Arabidopsis Description

Pirin-like protein At1g50590 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.