Factsheet for HORVU5Hr1G072760.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G098490.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59220.1	HORVU3Hr1G098490.1	AT1G09030.1	17322342

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	42.57	99.23
TraesCS5D01G270300.1	Wheat	cytosol	95.71	95.71
TraesCS5B01G261100.1	Wheat	mitochondrion	96.04	95.41
TraesCS5A01G262700.1	Wheat	mitochondrion	94.72	91.4
Os09t0484800-01	Rice	cytosol, mitochondrion	85.15	86.87
EER96962	Sorghum	cytosol	83.17	85.71
Zm00001d020915_P002	Maize	cytosol	83.5	85.47
GSMUA_Achr3P11020_001	Banana	cytosol	74.92	75.42
PGSC0003DMT400033425	Potato	mitochondrion	68.98	71.33
VIT_19s0090g01530.t01	Wine grape	cytosol	69.64	70.81
KRH14295	Soybean	cytosol	69.97	70.43
KRH73851	Soybean	cytoskeleton, cytosol, nucleus	69.31	69.77
KRH46283	Soybean	mitochondrion	66.01	67.11
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	62.05	63.95
AT1G50590.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	64.69	63.23
KRG98621	Soybean	nucleus	47.19	63.0
VIT_05s0094g00610.t01	Wine grape	cytosol	22.44	62.96
PGSC0003DMT400031088	Potato	cytosol	61.39	62.84
Solyc12g014590.1.1	Tomato	mitochondrion	67.33	62.39
CDY37125	Canola	cytosol	64.03	62.38
CDY22806	Canola	cytosol	63.7	62.06
Bra018859.1-P	Field mustard	cytosol	63.37	61.74
Bra000289.1-P	Field mustard	cytosol	59.74	61.36
Solyc09g098160.2.1	Tomato	mitochondrion	58.42	60.82
PGSC0003DMT400031070	Potato	mitochondrion	57.76	60.76
Bra004746.1-P	Field mustard	plastid	58.42	59.8
CDY55513	Canola	plastid	57.76	59.12
CDX83501	Canola	mitochondrion	60.07	56.88
CDY42802	Canola	mitochondrion	59.41	56.07
Solyc09g098180.2.1	Tomato	plastid	61.06	56.06
CDY17946	Canola	mitochondrion	58.75	55.97
KRH46866	Soybean	plastid	59.41	55.38
KRH01821	Soybean	plastid	59.08	55.25
AT3G59220.1	Thale cress	cytosol	52.15	55.05
HORVU5Hr1G120790.2	Barley	cytosol	59.08	54.41
CDY17721	Canola	mitochondrion	34.98	54.08
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	17.82	54.0
AT3G59260.1	Thale cress	cytosol	46.86	52.4
CDY06015	Canola	cytosol	48.18	51.41
PGSC0003DMT400057126	Potato	cytosol, mitochondrion, nucleus, plastid	50.49	51.34
CDX89016	Canola	nucleus	48.84	51.03
Solyc07g065160.2.1	Tomato	mitochondrion	49.51	50.34
CDX67787	Canola	nucleus	44.88	50.18
CDX98356	Canola	cytosol	43.56	50.0
Bra014547.1-P	Field mustard	nucleus	47.85	50.0
CDY57498	Canola	cytosol	45.54	49.64
CDY06016	Canola	cytosol	43.56	49.44
CDY00611	Canola	nucleus	45.87	48.1
AT2G43120.2	Thale cress	nucleus	58.75	47.85
CDY57499	Canola	cytoskeleton, cytosol, nucleus	48.51	47.57
Bra007437.1-P	Field mustard	cytosol	30.36	46.94
HORVU5Hr1G120780.3	Barley	plastid	59.08	46.61
Bra007438.1-P	Field mustard	cytosol	28.05	45.95
Bra003367.1-P	Field mustard	cytosol	28.38	45.03
HORVU5Hr1G120800.4	Barley	plastid	60.07	40.99
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	51.82	39.45
HORVU5Hr1G120810.1	Barley	plastid	30.69	37.35
VIT_09s0096g00380.t01	Wine grape	nucleus	11.22	24.29

Protein Annotations

EnsemblPlants:HORVU5Hr1G072760.2	EnsemblPlantsGene:HORVU5Hr1G072760	Gene3D:2.60.120.10	InterPro:IPR014710	InterPro:Pirin	InterPro:Pirin_C_dom
InterPro:Pirin_N_dom	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903	PANTHER:PTHR13903:SF5	PFAM:PF02678
PFAM:PF05726	PIRSF:PIRSF006232	SEG:seg	SUPFAM:SSF51182	UniParc:UPI000B47342E	UniProt:A0A287RRJ8
MapMan:35.1	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:A0A287RRJ8]

Coordinates

chrchr5H:+:536496074..536498225

Molecular Weight (calculated)

33136.3 Da

IEP (calculated)

6.184

GRAVY (calculated)

-0.266

Length

303 amino acids

Sequence
(BLAST)

001: MSTMEVRKPR QVARRFLARP QHEGAGAVVR RSIGRFELRY FDPFLVLDEF SGSAPAGFPD HPHRGFETVT YMLEGAVTHE DFEGHRGTIK AGDVQWMTAG
101: RGIVHSEMPA GPGTSKGLQL WVNLASKNKM VEPGYQEFQS KDIASTASAD GDVTVRVIAG QAMGARSPVR TRTPTMYLDF TVRPHAAAPV RQPVPASWNA
201: FVYVLEGEGV FGATADQAAG AHHLLLLGQG GDGVEAWNRS DKPLRFVLVA GEPIGEPVAQ LGPFVMNTEE EIDATVNDFE YFINGFEKAK HWKSQAMIAL
301: ELD

Best Arabidopsis Sequence Match ( AT1G50590.1 )
(BLAST)

001: MPISEKSSAT NTRLVVKKLF ARQLHEGFGA VVRRSIGRFE FRYFDPFLVL DEFSVSAPAG FPDHPHRGFE TVTYMLEGEI LHEDCEGHKG VIREGGLQWM
101: TAGKGIVHSE MPSSNSNGIT HNKGLQLWIN LSSRQKLVEP SYQEIESKDI AETEKDGVRV RVIAGEWNGV KSKICTRTPT MYLDFTLSPG SRISQPIPLH
201: WNAFVYVLQG HGHFGDSKLQ HSAAAAHHLL VLGLGGDMLE AWNGSDSGLP LRFILVAGEP IGEPMVQFGP FVMNTQEEID ETIDDFENFR NGFEKARHWK
301: SQAASALGLF

Arabidopsis Description

Pirin-like protein At1g50590 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.