Factsheet for HORVU5Hr1G120810.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G098490.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59220.1	HORVU3Hr1G098490.1	AT1G09030.1	17322342

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G336100.1	Wheat	nucleus	51.81	43.88
TraesCS5B01G535900.1	Wheat	plastid	51.41	43.54
VIT_05s0094g00610.t01	Wine grape	cytosol	18.88	43.52
TraesCS5D01G533400.1	Wheat	cytosol	51.0	43.2
HORVU5Hr1G120790.2	Barley	cytosol	51.0	38.6
KRG98621	Soybean	nucleus	33.73	37.0
GSMUA_Achr3P02460_001	Banana	cytosol	43.37	36.61
Os03t0845000-01	Rice	plasma membrane	52.21	36.01
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	41.77	35.37
CDY17721	Canola	mitochondrion	27.71	35.2
GSMUA_Achr9P01680_001	Banana	cytosol	41.37	34.68
GSMUA_Achr10P...	Banana	cytosol	41.37	34.56
Zm00001d008595_P001	Maize	plastid	45.78	34.44
VIT_19s0090g01530.t01	Wine grape	cytosol	40.96	34.23
Solyc09g098160.2.1	Tomato	mitochondrion	39.76	34.02
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	17.67	33.85
HORVU5Hr1G120780.3	Barley	plastid	51.81	33.59
PGSC0003DMT400031088	Potato	cytosol	39.76	33.45
OQU90634	Sorghum	mitochondrion	47.79	33.33
PGSC0003DMT400031070	Potato	mitochondrion	38.15	32.99
KRH46283	Soybean	mitochondrion	39.36	32.89
KRH73851	Soybean	cytoskeleton, cytosol, nucleus	39.36	32.56
KRH14295	Soybean	cytosol	38.96	32.23
PGSC0003DMT400033425	Potato	mitochondrion	37.35	31.74
KRH01821	Soybean	plastid	40.56	31.17
HORVU5Hr1G120800.4	Barley	plastid	55.02	30.86
KRH46866	Soybean	plastid	40.16	30.77
HORVU5Hr1G072760.2	Barley	mitochondrion	37.35	30.69
Solyc09g098180.2.1	Tomato	plastid	40.56	30.61
Bra000289.1-P	Field mustard	cytosol	36.14	30.51
Solyc07g065160.2.1	Tomato	mitochondrion	36.14	30.2
PGSC0003DMT400057126	Potato	cytosol, mitochondrion, nucleus, plastid	36.14	30.2
CDY55513	Canola	plastid	35.74	30.07
Bra004746.1-P	Field mustard	plastid	35.74	30.07
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	24.1	29.85
Zm00001d034829_P001	Maize	mitochondrion	45.38	29.82
Bra018859.1-P	Field mustard	cytosol	36.95	29.58
CDY22806	Canola	cytosol	36.55	29.26
CDX83501	Canola	mitochondrion	37.35	29.06
AT1G50590.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	36.14	29.03
CDY37125	Canola	cytosol	36.14	28.94
AT3G59220.1	Thale cress	cytosol	33.33	28.92
CDY42802	Canola	mitochondrion	36.95	28.66
CDY17946	Canola	mitochondrion	36.55	28.62
Solyc12g014590.1.1	Tomato	mitochondrion	36.95	28.13
AT3G59260.1	Thale cress	cytosol	30.12	27.68
CDX67787	Canola	nucleus	29.32	26.94
CDY00611	Canola	nucleus	30.52	26.3
CDX89016	Canola	nucleus	30.52	26.21
CDY57499	Canola	cytoskeleton, cytosol, nucleus	32.13	25.89
Bra014547.1-P	Field mustard	nucleus	30.12	25.86
AT2G43120.2	Thale cress	nucleus	38.55	25.81
CDX98356	Canola	cytosol	27.31	25.76
CDY57498	Canola	cytosol	28.11	25.18
Bra007437.1-P	Field mustard	cytosol	19.68	25.0
Bra003367.1-P	Field mustard	cytosol	18.88	24.61
CDY06015	Canola	cytosol	27.71	24.3
CDY06016	Canola	cytosol	24.9	23.22
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	8.84	22.22
Bra007438.1-P	Field mustard	cytosol	16.47	22.16
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	34.94	21.86
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	5.62	14.0
VIT_09s0096g00380.t01	Wine grape	nucleus	5.22	9.29

Protein Annotations

EnsemblPlants:HORVU5Hr1G120810.1	EnsemblPlantsGene:HORVU5Hr1G120810	Gene3D:2.60.120.10	InterPro:IPR014710	InterPro:Pirin_C_dom	InterPro:Pirin_N_dom
InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903	PANTHER:PTHR13903:SF5	PFAM:PF02678	PFAM:PF05726
SEG:seg	SUPFAM:SSF51182	UniParc:UPI000B484F8D	UniProt:A0A287SYT7	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr5H:-:658399785..658400880

Molecular Weight (calculated)

27100.2 Da

IEP (calculated)

8.572

GRAVY (calculated)

-0.498

Length

249 amino acids

Sequence
(BLAST)

001: RPPRPCRFRA RGRWSRRCCP CPSPRARAPP SAGASAGTNS GTWIHSCCST SSPSPSPPDS PTTRTGASRP SPTCSMGHSP TRTSPDTRAP SGPEMCRFHL
101: LIRFLRDLDP FCLDLRTNIA SECSVPHQWM TAGRGIVHSE MPAADGVQKG LQLWINLASK DKMIEPGYQE LESKDISQAE KDGVAVRIIA GEAFGVRSPV
201: YTRTPTMYMD FTMQPGSQLH QPIPEGWNAF VYIIEGEGVF GKEGTAPVS

Best Arabidopsis Sequence Match ( AT1G50590.2 )
(BLAST)

001: MLEGEILHED CEGHKGVIRE GGLQWMTAGK GIVHSEMPSS NSNGITHNKG LQLWINLSSR QKLVEPSYQE IESKDIAETE KDGVRVRVIA GEWNGVKSKI
101: CTRTPTMYLD FTLSPGSRIS QPIPLHWNAF VYVLQGHGHF GDSKLQHSAA AAHHLLVLGL GGDMLEAWNG SDSGLPLRFI LVAGEPIGEP MVQFGPFVMN
201: TQEEIDETID DFENFRNGFE KARHWKSQAA SALGLF

Arabidopsis Description

Pirin-like protein At1g50590 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.