Factsheet for HORVU1Hr1G086450.3

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:

plastid 2
mitochondrion 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G098490.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59220.1	HORVU3Hr1G098490.1	AT1G09030.1	17322342

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G420000.1	Wheat	plastid	75.13	83.06
TraesCS1D01G400000.1	Wheat	plastid	74.62	82.5
TraesCS1A01G391900.1	Wheat	plastid	74.12	81.49
Os08t0364900-00	Rice	plastid	56.03	63.35
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	19.1	58.46
VIT_05s0094g00610.t01	Wine grape	cytosol	15.58	57.41
Zm00001d032363_P001	Maize	cytosol	50.75	53.87
EES14882	Sorghum	cytosol, plastid	51.01	53.7
PGSC0003DMT400031088	Potato	cytosol	39.2	52.7
Solyc09g098160.2.1	Tomato	mitochondrion	38.19	52.23
HORVU5Hr1G072760.2	Barley	mitochondrion	39.45	51.82
PGSC0003DMT400031070	Potato	mitochondrion	37.19	51.39
VIT_19s0090g01530.t01	Wine grape	cytosol	38.19	51.01
Bra000289.1-P	Field mustard	cytosol	37.69	50.85
PGSC0003DMT400033425	Potato	mitochondrion	37.19	50.51
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	37.19	50.34
Bra004746.1-P	Field mustard	plastid	37.44	50.34
HORVU5Hr1G120790.2	Barley	cytosol	41.46	50.15
CDY17721	Canola	mitochondrion	24.62	50.0
CDX67787	Canola	nucleus	33.92	49.82
CDY55513	Canola	plastid	36.93	49.66
KRG98621	Soybean	nucleus	28.14	49.34
KRH46283	Soybean	mitochondrion	36.68	48.99
KRH73851	Soybean	cytoskeleton, cytosol, nucleus	36.93	48.84
CDY06015	Canola	cytosol	34.67	48.59
KRH14295	Soybean	cytosol	36.68	48.51
CDX98356	Canola	cytosol	31.91	48.11
CDY57498	Canola	cytosol	33.42	47.84
CDX83501	Canola	mitochondrion	38.44	47.81
CDY17946	Canola	mitochondrion	38.19	47.8
AT3G59220.1	Thale cress	cytosol	34.42	47.74
Solyc09g098180.2.1	Tomato	plastid	39.45	47.58
AT3G59260.1	Thale cress	cytosol	32.16	47.23
CDY42802	Canola	mitochondrion	37.94	47.04
AT1G50590.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	35.93	46.13
CDY22806	Canola	cytosol	35.18	45.02
CDY37125	Canola	cytosol	35.18	45.02
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	11.31	45.0
KRH46866	Soybean	plastid	36.68	44.92
KRH01821	Soybean	plastid	36.43	44.75
Bra018859.1-P	Field mustard	cytosol	34.92	44.69
Solyc12g014590.1.1	Tomato	mitochondrion	36.68	44.65
HORVU5Hr1G120780.3	Barley	plastid	42.71	44.27
CDY06016	Canola	cytosol	29.4	43.82
CDX89016	Canola	nucleus	31.91	43.79
CDY00611	Canola	nucleus	31.66	43.6
Bra014547.1-P	Field mustard	nucleus	31.66	43.45
CDY57499	Canola	cytoskeleton, cytosol, nucleus	33.67	43.37
Bra007438.1-P	Field mustard	cytosol	19.6	42.16
Bra003367.1-P	Field mustard	cytosol	20.1	41.88
Bra007437.1-P	Field mustard	cytosol	20.1	40.82
PGSC0003DMT400057126	Potato	cytosol, mitochondrion, nucleus, plastid	30.4	40.6
AT2G43120.2	Thale cress	nucleus	37.94	40.59
Solyc07g065160.2.1	Tomato	mitochondrion	30.15	40.27
HORVU5Hr1G120800.4	Barley	plastid	42.71	38.29
HORVU5Hr1G120810.1	Barley	plastid	21.86	34.94
VIT_09s0096g00380.t01	Wine grape	nucleus	6.53	18.57

Protein Annotations

EnsemblPlants:HORVU1Hr1G086450.3	EnsemblPlantsGene:HORVU1Hr1G086450	Gene3D:2.60.120.10	InterPro:IPR014710	InterPro:Pirin	InterPro:Pirin_C_dom
InterPro:Pirin_N_dom	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903	PANTHER:PTHR13903:SF11	PFAM:PF02678
PFAM:PF05726	PIRSF:PIRSF006232	SEG:seg	SUPFAM:SSF51182	UniParc:UPI000B465498	UniProt:A0A287GL94
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:537502510..537507213

Molecular Weight (calculated)

42440.8 Da

IEP (calculated)

4.880

GRAVY (calculated)

-0.288

Length

398 amino acids

Sequence
(BLAST)

001: MEAQTRSQRT YSSASQGLLL FLTCAYIDTL SQPAMSAAAC VSFCPSPASS RHGAGPIVDV VVGLPPATEA EEERGAGRGL LEFGADGMIG ASSDSDQDAA
101: AAAEIDDEEK HPVRRSRAVV QKFMCERKVV GDGFALRRSI GRPELQSLDP FISLDEFEFS RPAGFSDHPH RGFENVTYML EGGLSYHDFS GHKGTVNTGD
201: VQWMTAGRGV VHAEMPGGEG VQRGLNLWLN LSSKDKMVAP RYQDLRSRDV ASAEKDGVSV KVIAGEALGA RSPIQTRTPA MWLDVTMQPA ACLRQPVPAG
301: WTACAYVLDG EASFGQPGDE AAGAHQCVVF GGDGDGVDVR TGGARARFLL LAARPHGEAV AMDGPFVMNT SEEVQQARED YLNRRNGFEL AAGWSSGQ

Best Arabidopsis Sequence Match ( AT1G50590.1 )
(BLAST)

001: MPISEKSSAT NTRLVVKKLF ARQLHEGFGA VVRRSIGRFE FRYFDPFLVL DEFSVSAPAG FPDHPHRGFE TVTYMLEGEI LHEDCEGHKG VIREGGLQWM
101: TAGKGIVHSE MPSSNSNGIT HNKGLQLWIN LSSRQKLVEP SYQEIESKDI AETEKDGVRV RVIAGEWNGV KSKICTRTPT MYLDFTLSPG SRISQPIPLH
201: WNAFVYVLQG HGHFGDSKLQ HSAAAAHHLL VLGLGGDMLE AWNGSDSGLP LRFILVAGEP IGEPMVQFGP FVMNTQEEID ETIDDFENFR NGFEKARHWK
301: SQAASALGLF

Arabidopsis Description

Pirin-like protein At1g50590 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.