Factsheet for HORVU5Hr1G092220.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

mitochondrion 3
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G098490.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59220.1	HORVU3Hr1G098490.1	AT1G09030.1	17322342

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0094g00610.t01	Wine grape	cytosol	45.38	54.63
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	41.54	54.0
CDY17721	Canola	mitochondrion	64.62	42.86
HORVU5Hr1G072760.2	Barley	mitochondrion	99.23	42.57
TraesCS5B01G261100.1	Wheat	mitochondrion	98.46	41.97
TraesCS5D01G270300.1	Wheat	cytosol	96.15	41.25
TraesCS5A01G262700.1	Wheat	mitochondrion	98.46	40.76
EER96962	Sorghum	cytosol	90.0	39.8
Zm00001d020915_P002	Maize	cytosol	90.0	39.53
Os09t0484800-01	Rice	cytosol, mitochondrion	90.0	39.39
GSMUA_Achr3P11020_001	Banana	cytosol	86.15	37.21
PGSC0003DMT400033425	Potato	mitochondrion	81.54	36.18
PGSC0003DMT400057126	Potato	cytosol, mitochondrion, nucleus, plastid	81.54	35.57
KRH14295	Soybean	cytosol	81.54	35.22
VIT_19s0090g01530.t01	Wine grape	cytosol	80.0	34.9
KRH73851	Soybean	cytoskeleton, cytosol, nucleus	80.77	34.88
Solyc07g065160.2.1	Tomato	mitochondrion	79.23	34.56
KRH46283	Soybean	mitochondrion	77.69	33.89
Solyc09g098160.2.1	Tomato	mitochondrion	73.08	32.65
PGSC0003DMT400031070	Potato	mitochondrion	72.31	32.64
PGSC0003DMT400031088	Potato	cytosol	73.08	32.09
Solyc12g014590.1.1	Tomato	mitochondrion	80.0	31.8
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	70.77	31.29
CDY22806	Canola	cytosol	71.54	29.9
CDY37125	Canola	cytosol	71.54	29.9
Bra018859.1-P	Field mustard	cytosol	70.77	29.58
Solyc09g098180.2.1	Tomato	plastid	73.08	28.79
Bra000289.1-P	Field mustard	cytosol	64.62	28.47
AT1G50590.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	67.69	28.39
Bra004746.1-P	Field mustard	plastid	64.62	28.38
CDY55513	Canola	plastid	64.62	28.38
KRH46866	Soybean	plastid	68.46	27.38
HORVU5Hr1G120790.2	Barley	cytosol	69.23	27.36
KRH01821	Soybean	plastid	67.69	27.16
CDX83501	Canola	mitochondrion	65.38	26.56
CDY17946	Canola	mitochondrion	64.62	26.42
CDY42802	Canola	mitochondrion	64.62	26.17
AT3G59220.1	Thale cress	cytosol	56.92	25.78
CDX89016	Canola	nucleus	54.62	24.48
VIT_09s0096g00380.t01	Wine grape	nucleus	26.15	24.29
Bra014547.1-P	Field mustard	nucleus	53.08	23.79
HORVU5Hr1G120780.3	Barley	plastid	70.0	23.7
CDY06015	Canola	cytosol	50.77	23.24
CDY00611	Canola	nucleus	51.54	23.18
CDY57499	Canola	cytoskeleton, cytosol, nucleus	54.62	22.98
AT2G43120.2	Thale cress	nucleus	65.38	22.85
CDY57498	Canola	cytosol	47.69	22.3
AT3G59260.1	Thale cress	cytosol	46.15	22.14
CDX67787	Canola	nucleus	45.38	21.77
CDY06016	Canola	cytosol	42.31	20.6
CDX98356	Canola	cytosol	41.54	20.45
HORVU5Hr1G120800.4	Barley	plastid	69.23	20.27
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	58.46	19.1
KRG98621	Soybean	nucleus	31.54	18.06
HORVU5Hr1G120810.1	Barley	plastid	33.85	17.67
Bra007437.1-P	Field mustard	cytosol	11.54	7.65
Bra007438.1-P	Field mustard	cytosol	5.38	3.78
Bra003367.1-P	Field mustard	cytosol	5.38	3.66

Protein Annotations

EnsemblPlants:HORVU5Hr1G092220.3	EnsemblPlantsGene:HORVU5Hr1G092220	Gene3D:2.60.120.10	InterPro:IPR014710	InterPro:Pirin_N_dom	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903	PANTHER:PTHR13903:SF5	PFAM:PF02678	SUPFAM:SSF51182	UniParc:UPI000B4810DB
UniProt:A0A287S8N6	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:587843688..587844858

Molecular Weight (calculated)

14480.4 Da

IEP (calculated)

10.151

GRAVY (calculated)

-0.421

Length

130 amino acids

Sequence
(BLAST)

001: MSTMEVRKPR QVARRFLARP QHEGAGAVVR RSIGRFELRY FDPFLVLDEF SASAPAGFPD HPHRGFETVT YMLEGAVTHE DFEGHRGTIK AGDVQWMTAG
101: RGIVHSEMPA GPGTSKGLQL WVNLASKNKM

Best Arabidopsis Sequence Match ( AT1G50590.1 )
(BLAST)

001: MPISEKSSAT NTRLVVKKLF ARQLHEGFGA VVRRSIGRFE FRYFDPFLVL DEFSVSAPAG FPDHPHRGFE TVTYMLEGEI LHEDCEGHKG VIREGGLQWM
101: TAGKGIVHSE MPSSNSNGIT HNKGLQLWIN LSSRQKLVEP SYQEIESKDI AETEKDGVRV RVIAGEWNGV KSKICTRTPT MYLDFTLSPG SRISQPIPLH
201: WNAFVYVLQG HGHFGDSKLQ HSAAAAHHLL VLGLGGDMLE AWNGSDSGLP LRFILVAGEP IGEPMVQFGP FVMNTQEEID ETIDDFENFR NGFEKARHWK
301: SQAASALGLF

Arabidopsis Description

Pirin-like protein At1g50590 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.