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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS3A01G457000.1
TraesCS3D01G450000.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G59220.1 TraesCS3A01G457000.1 AT1G09030.1 17322342
AT3G59220.1 TraesCS3D01G450000.1 AT1G09030.1 17322342
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G261100.1 Wheat mitochondrion 97.69 97.05
HORVU5Hr1G092220.3 Barley mitochondrion, peroxisome 41.25 96.15
HORVU5Hr1G072760.2 Barley mitochondrion 95.71 95.71
TraesCS5A01G262700.1 Wheat mitochondrion 97.03 93.63
Os09t0484800-01 Rice cytosol, mitochondrion 84.82 86.53
EER96962 Sorghum cytosol 83.5 86.05
Zm00001d020915_P002 Maize cytosol 83.5 85.47
GSMUA_Achr3P11020_001 Banana cytosol 75.58 76.08
PGSC0003DMT400033425 Potato mitochondrion 69.31 71.67
VIT_19s0090g01530.t01 Wine grape cytosol 69.97 71.14
KRH14295 Soybean cytosol 69.97 70.43
KRH73851 Soybean cytoskeleton, cytosol, nucleus 69.31 69.77
KRH46283 Soybean mitochondrion 66.01 67.11
VIT_05s0062g01190.t01 Wine grape cytosol, nucleus, peroxisome 62.05 63.95
PGSC0003DMT400031088 Potato cytosol 62.05 63.51
KRG98621 Soybean nucleus 47.52 63.44
AT1G50590.1 Thale cress cytosol, mitochondrion, nucleus, plastid 64.36 62.9
Solyc12g014590.1.1 Tomato mitochondrion 67.66 62.69
VIT_05s0094g00610.t01 Wine grape cytosol 22.11 62.04
TraesCS5D01G533200.1 Wheat cytosol, mitochondrion, nucleus, plastid 59.41 61.86
CDY37125 Canola cytosol 63.37 61.74
Bra000289.1-P Field mustard cytosol 60.07 61.69
TraesCS5D01G533400.1 Wheat cytosol 59.74 61.56
CDY22806 Canola cytosol 63.04 61.41
Solyc09g098160.2.1 Tomato mitochondrion 58.75 61.17
PGSC0003DMT400031070 Potato mitochondrion 58.09 61.11
Bra018859.1-P Field mustard cytosol 62.71 61.09
Bra004746.1-P Field mustard plastid 58.75 60.14
TraesCS5D01G533500.1 Wheat plastid 59.74 60.13
CDY55513 Canola plastid 58.09 59.46
CDX83501 Canola mitochondrion 60.4 57.19
Solyc09g098180.2.1 Tomato plastid 61.72 56.67
CDY42802 Canola mitochondrion 59.74 56.39
CDY17946 Canola mitochondrion 59.08 56.29
KRH46866 Soybean plastid 60.07 56.0
KRH01821 Soybean plastid 59.74 55.86
AT3G59220.1 Thale cress cytosol 51.49 54.36
CDY17721 Canola mitochondrion 34.65 53.57
AT3G59260.1 Thale cress cytosol 47.52 53.14
VIT_09s0096g00130.t01 Wine grape cytosol, nucleus, plastid 17.49 53.0
PGSC0003DMT400057126 Potato cytosol, mitochondrion, nucleus, plastid 50.83 51.68
CDY06015 Canola cytosol 48.18 51.41
CDX67787 Canola nucleus 45.54 50.92
CDX98356 Canola cytosol 44.22 50.76
Solyc07g065160.2.1 Tomato mitochondrion 49.84 50.67
CDX89016 Canola nucleus 48.18 50.34
CDY57498 Canola cytosol 45.54 49.64
Bra014547.1-P Field mustard nucleus 47.19 49.31
CDY06016 Canola cytosol 42.57 48.31
AT2G43120.2 Thale cress nucleus 58.75 47.85
CDY00611 Canola nucleus 45.54 47.75
TraesCS5D01G533100.1 Wheat plastid 59.41 47.75
CDY57499 Canola cytoskeleton, cytosol, nucleus 47.52 46.6
Bra003367.1-P Field mustard cytosol 29.04 46.07
Bra007438.1-P Field mustard cytosol 28.05 45.95
Bra007437.1-P Field mustard cytosol 29.7 45.92
TraesCS1D01G400000.1 Wheat plastid 51.49 43.33
VIT_09s0096g00380.t01 Wine grape nucleus 11.22 24.29
Protein Annotations
EnsemblPlants:TraesCS5D01G270300.1EnsemblPlantsGene:TraesCS5D01G270300Gene3D:2.60.120.10InterPro:IPR014710InterPro:PirinInterPro:Pirin_C_dom
InterPro:Pirin_N_domInterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfPANTHER:PTHR13903PANTHER:PTHR13903:SF5PFAM:PF02678
PFAM:PF05726PIRSF:PIRSF006232SEG:segSUPFAM:SSF51182MapMan:35.1:
Description
No Description!
Coordinates
chr5D:+:373951163..373952774
Molecular Weight (calculated)
33293.5 Da
IEP (calculated)
6.001
GRAVY (calculated)
-0.289
Length
303 amino acids
Sequence
(BLAST)
001: MEVKKPRQVA RRFLARPQHE GAGAVVRRSI GRFELRYFDP FLVLDEFSAS APSGFPDHPH RGFETVTYML EGAVTHEDFE GHRGTIKAGD VQWMTAGRGI
101: VHSEMPAGPG TSKGLQLWVN LASKNKMVEP GYQEFQSKDI ASTTSADGDV TVRVIAGEAM GARSPVRTRT PTMYLDFTVR PHATAPVRQP VPASWNAFVY
201: VLEGEGVFGP TADQPAGAHH LLLLGQGGDG VEVWNRSDKP LRFVLVAGEP IGEPVAQLGP FVMNTEEEID ATVNDFEYFI NGFEKAKHWK SQAMIALELE
301: YVG
Best Arabidopsis Sequence Match ( AT1G50590.1 )
(BLAST)
001: MPISEKSSAT NTRLVVKKLF ARQLHEGFGA VVRRSIGRFE FRYFDPFLVL DEFSVSAPAG FPDHPHRGFE TVTYMLEGEI LHEDCEGHKG VIREGGLQWM
101: TAGKGIVHSE MPSSNSNGIT HNKGLQLWIN LSSRQKLVEP SYQEIESKDI AETEKDGVRV RVIAGEWNGV KSKICTRTPT MYLDFTLSPG SRISQPIPLH
201: WNAFVYVLQG HGHFGDSKLQ HSAAAAHHLL VLGLGGDMLE AWNGSDSGLP LRFILVAGEP IGEPMVQFGP FVMNTQEEID ETIDDFENFR NGFEKARHWK
301: SQAASALGLF
Arabidopsis Description
Pirin-like protein At1g50590 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.