Factsheet for Solyc07g065160.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057126	Potato	cytosol, mitochondrion, nucleus, plastid	97.32	97.32
HORVU5Hr1G092220.3	Barley	mitochondrion, peroxisome	34.56	79.23
KRH14295	Soybean	cytosol	58.39	57.81
KRH73851	Soybean	cytoskeleton, cytosol, nucleus	58.39	57.81
VIT_19s0090g01530.t01	Wine grape	cytosol	57.38	57.38
KRH46283	Soybean	mitochondrion	56.38	56.38
Solyc12g014590.1.1	Tomato	mitochondrion	59.4	54.13
GSMUA_Achr3P11020_001	Banana	cytosol	52.68	52.16
EER96962	Sorghum	cytosol	51.34	52.04
GSMUA_Achr3P02460_001	Banana	cytosol	51.01	51.53
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	17.11	51.52
Os09t0484800-01	Rice	cytosol, mitochondrion	51.34	51.52
Zm00001d020915_P002	Maize	cytosol	50.67	51.01
Solyc09g098160.2.1	Tomato	mitochondrion	49.66	50.86
GSMUA_Achr10P...	Banana	cytosol	50.34	50.34
TraesCS5D01G270300.1	Wheat	cytosol	50.67	49.84
HORVU5Hr1G072760.2	Barley	mitochondrion	50.34	49.51
GSMUA_Achr9P01680_001	Banana	cytosol	49.33	49.49
TraesCS4A01G336100.1	Wheat	nucleus	48.66	49.32
TraesCS5B01G261100.1	Wheat	mitochondrion	50.34	49.18
TraesCS5B01G535900.1	Wheat	plastid	48.32	48.98
TraesCS5D01G533400.1	Wheat	cytosol	48.32	48.98
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	47.65	48.8
TraesCS5A01G262700.1	Wheat	mitochondrion	51.01	48.41
TraesCS5D01G533500.1	Wheat	plastid	48.32	47.84
AT1G50590.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	49.33	47.42
CDY37125	Canola	cytosol	49.33	47.27
KRG98621	Soybean	nucleus	35.91	47.14
CDY22806	Canola	cytosol	48.99	46.95
Bra018859.1-P	Field mustard	cytosol	48.32	46.3
Solyc09g098180.2.1	Tomato	plastid	51.01	46.06
TraesCS4A01G335900.1	Wheat	plastid	42.95	43.54
HORVU5Hr1G120790.2	Barley	cytosol	47.65	43.16
Zm00001d008595_P001	Maize	plastid	45.97	41.39
Os03t0845000-01	Rice	plasma membrane	49.33	40.72
OQU90634	Sorghum	mitochondrion	48.66	40.62
TraesCS4A01G336000.2	Wheat	nucleus	43.62	39.27
TraesCS4A01G336200.2	Wheat	plastid	48.32	38.92
TraesCS5B01G536000.2	Wheat	plastid	48.32	38.92
TraesCS5B01G535700.3	Wheat	plastid	47.65	38.48
TraesCS5B01G535800.1	Wheat	plastid	47.99	38.44
TraesCS5D01G533100.1	Wheat	plastid	48.32	38.2
Zm00001d046171_P001	Maize	endoplasmic reticulum, mitochondrion, nucleus, plastid	25.5	37.81
HORVU5Hr1G120780.3	Barley	plastid	47.99	37.24
Zm00001d034829_P001	Maize	mitochondrion	46.64	36.68
HORVU5Hr1G120810.1	Barley	plastid	30.2	36.14
TraesCS1B01G420000.1	Wheat	plastid	42.28	35.0
TraesCS1A01G391900.1	Wheat	plastid	41.61	34.25
TraesCS1D01G400000.1	Wheat	plastid	40.94	33.89
Os08t0364900-00	Rice	plastid	38.93	32.95
HORVU5Hr1G120800.4	Barley	plastid	48.32	32.43
HORVU1Hr1G086450.3	Barley	endoplasmic reticulum, plastid	40.27	30.15
Zm00001d032363_P001	Maize	cytosol	35.91	28.53
EES14882	Sorghum	cytosol, plastid	35.57	28.04

Protein Annotations

EnsemblPlants:Solyc07g065160.2.1	EnsemblPlantsGene:Solyc07g065160.2	Gene3D:2.60.120.10	InterPro:IPR014710	InterPro:Pirin	InterPro:Pirin_C_dom
InterPro:Pirin_N_dom	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903	PANTHER:PTHR13903:SF5	PFAM:PF02678
PFAM:PF05726	PIRSF:PIRSF006232	SUPFAM:SSF51182	UniParc:UPI000276CA43	UniProt:K4CHJ5	MapMan:35.1

Description

No Description!

Coordinates

chr7:-:67044619..67047344

Molecular Weight (calculated)

33191.6 Da

IEP (calculated)

6.979

GRAVY (calculated)

-0.294

Length

298 amino acids

Sequence
(BLAST)

001: MSIVREPRSI ARKFLARPQQ EGLGAVVRRS IGRFEIRYFD PFIVLDEFSV SAPAGFPDHP HRGFETVTYM LQGAVTHEDF DGHKGTIKAG DLQWMTAGRG
101: VVHSEMPAAE GIQKGLQLWI NLSSQHKMIQ PRYQEISSAN ISEATKDGVK VRVIAGEALG IKSTIHTKTP TIYLDFTLKP GSQIQQPIPK SYNSFVYILE
201: GEGIFGQDSR TNSPISSHNL LLLSGFGDGI VAYNKGTKIL RFILVGGEPL GEPIAQLGPF VMNTQEEIDQ TIEDFENYTN GFEKARYWRS QARVELGY

Best Arabidopsis Sequence Match ( AT1G50590.1 )
(BLAST)

001: MPISEKSSAT NTRLVVKKLF ARQLHEGFGA VVRRSIGRFE FRYFDPFLVL DEFSVSAPAG FPDHPHRGFE TVTYMLEGEI LHEDCEGHKG VIREGGLQWM
101: TAGKGIVHSE MPSSNSNGIT HNKGLQLWIN LSSRQKLVEP SYQEIESKDI AETEKDGVRV RVIAGEWNGV KSKICTRTPT MYLDFTLSPG SRISQPIPLH
201: WNAFVYVLQG HGHFGDSKLQ HSAAAAHHLL VLGLGGDMLE AWNGSDSGLP LRFILVAGEP IGEPMVQFGP FVMNTQEEID ETIDDFENFR NGFEKARHWK
301: SQAASALGLF

Arabidopsis Description

Pirin-like protein At1g50590 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.