Factsheet for Zm00001d046171_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, nucleus

Predictor Summary:

mitochondrion 3
endoplasmic reticulum 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d042197_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59220.1	Zm00001d042197_P001	AT1G09030.1	17322342

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0094g00610.t01	Wine grape	cytosol	32.84	61.11
Zm00001d009514_P001	Maize	cytosol, endoplasmic reticulum	27.36	55.56
CDY17721	Canola	mitochondrion	40.3	41.33
TraesCS5B01G535900.1	Wheat	plastid	50.75	34.69
TraesCS4A01G336100.1	Wheat	nucleus	50.25	34.35
TraesCS5D01G533400.1	Wheat	cytosol	49.75	34.01
PGSC0003DMT400031088	Potato	cytosol	49.75	33.78
TraesCS5D01G533200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	48.76	33.68
GSMUA_Achr3P02460_001	Banana	cytosol	48.76	33.22
PGSC0003DMT400031070	Potato	mitochondrion	47.26	32.99
TraesCS5D01G533500.1	Wheat	plastid	49.25	32.89
GSMUA_Achr9P01680_001	Banana	cytosol	48.26	32.66
Solyc09g098160.2.1	Tomato	mitochondrion	47.26	32.65
VIT_05s0062g01190.t01	Wine grape	cytosol, nucleus, peroxisome	47.26	32.31
Zm00001d008595_P001	Maize	plastid	52.74	32.02
VIT_09s0096g00130.t01	Wine grape	cytosol, nucleus, plastid	15.92	32.0
GSMUA_Achr10P...	Banana	cytosol	46.77	31.54
HORVU5Hr1G120790.2	Barley	cytosol	50.25	30.7
Solyc09g098180.2.1	Tomato	plastid	49.75	30.3
TraesCS4A01G335900.1	Wheat	plastid	44.28	30.27
OQU90634	Sorghum	mitochondrion	53.73	30.25
VIT_19s0090g01530.t01	Wine grape	cytosol	44.28	29.87
Zm00001d020915_P002	Maize	cytosol	43.78	29.73
CDY55513	Canola	plastid	43.78	29.73
Bra004746.1-P	Field mustard	plastid	43.78	29.73
KRH46283	Soybean	mitochondrion	43.78	29.53
Bra000289.1-P	Field mustard	cytosol	43.28	29.49
KRG98621	Soybean	nucleus	32.84	29.07
KRH73851	Soybean	cytoskeleton, cytosol, nucleus	43.28	28.9
Os03t0845000-01	Rice	plasma membrane	51.74	28.81
KRH14295	Soybean	cytosol	42.79	28.57
Zm00001d034829_P001	Maize	mitochondrion	53.73	28.5
PGSC0003DMT400033425	Potato	mitochondrion	40.8	27.99
CDX83501	Canola	mitochondrion	44.28	27.81
KRH01821	Soybean	plastid	44.78	27.78
CDY42802	Canola	mitochondrion	44.28	27.73
KRH46866	Soybean	plastid	44.78	27.69
CDY17946	Canola	mitochondrion	43.78	27.67
AT3G59260.1	Thale cress	cytosol	36.32	26.94
TraesCS5B01G535800.1	Wheat	plastid	49.75	26.88
TraesCS5B01G536000.2	Wheat	plastid	49.25	26.76
CDX67787	Canola	nucleus	35.82	26.57
HORVU5Hr1G120780.3	Barley	plastid	50.75	26.56
TraesCS5B01G535700.3	Wheat	plastid	48.76	26.56
TraesCS5D01G533100.1	Wheat	plastid	49.75	26.53
TraesCS4A01G336200.2	Wheat	plastid	48.76	26.49
AT3G59220.1	Thale cress	cytosol	37.81	26.48
PGSC0003DMT400057126	Potato	cytosol, mitochondrion, nucleus, plastid	38.31	25.84
AT1G50590.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	39.8	25.81
CDX98356	Canola	cytosol	33.83	25.76
Solyc07g065160.2.1	Tomato	mitochondrion	37.81	25.5
CDY37125	Canola	cytosol	39.3	25.4
CDY22806	Canola	cytosol	39.3	25.4
Bra018859.1-P	Field mustard	cytosol	38.81	25.08
Solyc12g014590.1.1	Tomato	mitochondrion	40.3	24.77
CDX89016	Canola	nucleus	34.83	24.14
HORVU5Hr1G120810.1	Barley	plastid	29.85	24.1
AT2G43120.2	Thale cress	nucleus	44.28	23.92
Bra014547.1-P	Field mustard	nucleus	34.33	23.79
CDY06015	Canola	cytosol	33.33	23.59
TraesCS4A01G336000.2	Wheat	nucleus	38.81	23.57
CDY57499	Canola	cytoskeleton, cytosol, nucleus	35.82	23.3
CDY00611	Canola	nucleus	33.33	23.18
HORVU5Hr1G120800.4	Barley	plastid	50.75	22.97
CDY57498	Canola	cytosol	30.85	22.3
CDY06016	Canola	cytosol	27.36	20.6
Zm00001d032363_P001	Maize	cytosol	34.33	18.4
Bra007437.1-P	Field mustard	cytosol	14.43	14.8
Bra003367.1-P	Field mustard	cytosol	12.44	13.09
Bra007438.1-P	Field mustard	cytosol	9.45	10.27
VIT_09s0096g00380.t01	Wine grape	nucleus	6.97	10.0

Protein Annotations

EnsemblPlants:Zm00001d046171_P001	EnsemblPlants:Zm00001d046171_T001	EnsemblPlantsGene:Zm00001d046171	Gene3D:2.60.120.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR014710	InterPro:Pirin_N_dom	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR13903
PANTHER:PTHR13903:SF5	PFAM:PF02678	ProteinID:AQL03789.1	SEG:seg	SUPFAM:SSF51182	TMHMM:TMhelix
UniParc:UPI000844EAF0	UniProt:A0A1D6P132	MapMan:35.1	:	:	:

Description

Pirin-like protein 2

Coordinates

chr9:-:68900347..68901618

Molecular Weight (calculated)

22071.3 Da

IEP (calculated)

8.982

GRAVY (calculated)

-0.434

Length

201 amino acids

Sequence
(BLAST)

001: MLQQQQQASK SLASAWRGGV LEQRSVRDLM SGGADEETRR SWSCARLWLL VVCALTSLSV GVVVSKSTGF SNHPHRGFET GAFTHQDFAG HKGTIRTGDV
101: QWMTAGRGIV HSEMPAGDDV HKGLQLWINL SSKYKMIEPQ YQELERKDIS RGESENGGVE ALGVATPVYT HPHHVCGLHH APRVSPAPAR PGGLECLRLR
201: R

Best Arabidopsis Sequence Match ( AT2G43120.1 )
(BLAST)

001: MRAAINRANS LGGLFSFRFI RNIKSMSSST SQDFVSRPVI KKVFAKLQKE GDGAVVRRGI SRSEQKLLDP FLMLDEFSVS PPAGFPDHPH RGFETVTYVL
101: EGGITHQDFK GHKGTIYAGD VQWMTAGRGI IHSEMPEEEV NKGLQLWINL SSNEKMIEPN YQELSHSDIP KAEQNGVEVK VIAGESMGIQ SPVYTRTPTM
201: FLDFTLQPGA QIHQNVPESW NAFAYILESG EGGGVFSSSN SSPIPAHSVV VFGPGNDGVS VWNKSSSKQL RFVLIAGEPI GEPVVQYGPF VMNTQAEIDM
301: TIEDYHYGKN GFEMAKYWRS Q

Arabidopsis Description

RmlC-like cupins superfamily protein [Source:TAIR;Acc:AT2G43120]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.