Factsheet for TraesCS7D01G216600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G121800.1	Wheat	nucleus	91.13	89.0
TraesCS7A01G214500.1	Wheat	nucleus	86.69	85.23
TraesCS7D01G216800.1	Wheat	nucleus	83.96	82.83
HORVU7Hr1G043520.1	Barley	nucleus	80.55	73.98
Os06t0285200-01	Rice	nucleus	44.71	52.4
OQU76250	Sorghum	nucleus	39.59	44.44
TraesCS6D01G268000.1	Wheat	nucleus	35.49	42.28
Zm00001d045772_P001	Maize	nucleus, plastid	37.2	41.6
TraesCS1D01G419500.1	Wheat	nucleus	18.09	38.97
TraesCS3D01G347000.1	Wheat	nucleus	21.16	38.04
TraesCS3D01G450100.1	Wheat	nucleus	21.5	34.24
TraesCS1D01G287500.1	Wheat	nucleus	21.16	34.07
TraesCS2D01G180700.1	Wheat	nucleus	24.23	31.56
PGSC0003DMT400057379	Potato	nucleus	18.09	30.64
TraesCS6D01G268100.1	Wheat	cytosol, nucleus, plastid	16.72	30.06
TraesCS3D01G450000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	17.41	29.65
Solyc07g065570.1.1	Tomato	nucleus	18.77	29.26
Solyc07g065580.1.1	Tomato	nucleus	17.41	28.65
TraesCS2D01G358300.1	Wheat	nucleus	22.87	26.91
KRH70381	Soybean	cytosol	17.75	23.01
KRH49798	Soybean	cytosol, golgi, nucleus	15.7	19.91
TraesCS3D01G443500.1	Wheat	cytosol, mitochondrion, nucleus	13.31	13.09

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	InterPro:CBFA_NFYB_domain	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072	PFAM:PF00808	PRINTS:PR00615
ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF86	SUPFAM:SSF47113	EnsemblPlantsGene:TraesCS7D01G216600	EnsemblPlants:TraesCS7D01G216600.1
InterPro:Transcrpt_fac_NFYB/HAP3_CS	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:176443124..176444005

Molecular Weight (calculated)

31496.3 Da

IEP (calculated)

5.351

GRAVY (calculated)

-0.432

Length

293 amino acids

Sequence
(BLAST)

001: MENADVPNGA TAPAPTQATP VVREQDRLMP IANVIRIMRR ALPAHAKISD DAKEAIQECV SEFISFVTGE ANERCHMEHR KTVNAEDIVW ALNRLGFDDY
101: VVPLSVFLHR MRDPEAATGG AAAGDRRAVT SAPPRAAPPV LHAMPLHAQM QRPMYAPPAL VQVQNQMQRP IYAPPAPMQV QNQVQWPMYA PPPPVQVQMQ
201: RGVYAPQAPV QGYAVGITPV RANVDGQCQV FGGERAVAQQ YYGYGYGEGS SNGGACADEE SSSNSVPVPG KGTGEPEPEP AAEESQGKPI QSG

Best Arabidopsis Sequence Match ( AT1G21970.1 )
(BLAST)

001: MERGAPFSHY QLPKSISELN LDQHSNNPTP MTSSVVVAGA GDKNNGIVVQ QQPPCVAREQ DQYMPIANVI RIMRKTLPSH AKISDDAKET IQECVSEYIS
101: FVTGEANERC QREQRKTITA EDILWAMSKL GFDNYVDPLT VFINRYREIE TDRGSALRGE PPSLRQTYGG NGIGFHGPSH GLPPPGPYGY GMLDQSMVMG
201: GGRYYQNGSS GQDESSVGGG SSSSINGMPA FDHYGQYK

Arabidopsis Description

NFYB9Nuclear transcription factor Y subunit B-9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFD8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.