Factsheet for TraesCS3D01G450100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G203900.1	Wheat	nucleus	98.91	99.45
TraesCSU01G051000.1	Wheat	nucleus	98.91	99.45
TraesCSU01G050900.1	Wheat	nucleus	98.91	99.45
HORVU3Hr1G098500.1	Barley	nucleus	96.74	97.27
TraesCS3A01G457100.1	Wheat	nucleus	99.46	96.32
EES04176	Sorghum	nucleus	70.11	70.88
Zm00001d042196_P001	Maize	nucleus	68.48	70.39
Os01t0935200-01	Rice	nucleus	67.39	70.06
KRH50875	Soybean	nucleus	45.11	68.59
KRH37126	Soybean	nucleus	43.48	68.38
Zm00001d011915_P001	Maize	nucleus	61.41	66.08
KRH02238	Soybean	nucleus	43.48	65.04
GSMUA_Achr8P10020_001	Banana	nucleus	60.87	64.0
VIT_05s0020g01350.t01	Wine grape	nucleus	47.83	63.77
GSMUA_Achr11P...	Banana	nucleus	57.07	63.25
KRH31905	Soybean	cytosol, mitochondrion, nucleus	47.83	60.69
KRH71548	Soybean	nucleus	47.28	59.18
PGSC0003DMT400058414	Potato	nucleus	42.93	58.09
Solyc01g067130.2.1	Tomato	plastid	42.93	57.25
KRH12126	Soybean	nucleus	44.57	56.94
GSMUA_Achr5P17480_001	Banana	nucleus	49.46	56.52
VIT_07s0104g01640.t01	Wine grape	nucleus	47.83	50.29
Solyc06g009010.1.1	Tomato	nucleus	47.28	48.88
PGSC0003DMT400037958	Potato	nucleus	47.28	48.88
TraesCS1D01G419500.1	Wheat	nucleus	35.87	48.53
TraesCS3D01G347000.1	Wheat	nucleus	38.59	43.56
TraesCS3D01G450000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	38.59	41.28
TraesCS1D01G287500.1	Wheat	nucleus	40.76	41.21
TraesCS2D01G180700.1	Wheat	nucleus	43.48	35.56
TraesCS2D01G358300.1	Wheat	nucleus	42.93	31.73
TraesCS6D01G268100.1	Wheat	cytosol, nucleus, plastid	26.09	29.45
TraesCS6D01G268000.1	Wheat	nucleus	35.87	26.83
TraesCS7D01G216600.1	Wheat	nucleus	34.24	21.5
TraesCS7D01G216800.1	Wheat	nucleus	33.7	20.88
TraesCS3D01G443500.1	Wheat	cytosol, mitochondrion, nucleus	18.48	11.41

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	InterPro:CBFA_NFYB_domain	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072	PFAM:PF00808	PRINTS:PR00615
ScanProsite:PS00685	PANTHER:PTHR11064	PANTHER:PTHR11064:SF88	SUPFAM:SSF47113	EnsemblPlantsGene:TraesCS3D01G450100	EnsemblPlants:TraesCS3D01G450100.1
InterPro:Transcrpt_fac_NFYB/HAP3_CS	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:558292016..558292570

Molecular Weight (calculated)

19295.5 Da

IEP (calculated)

6.674

GRAVY (calculated)

-0.616

Length

184 amino acids

Sequence
(BLAST)

001: MADHHYTHLG GGSGSGSGGG GGGSPPERLH GGGGSGDQGI KEQDRLLPIA NVGRIMKQVL PPNAKVSKEA KETMQECVSE FISFVTGEAS DKCHKEKRKT
101: VNGDDVCWAF SALGFDDYVD PMRRYLLKFR ELEGDRAAAA ASSRGGLPVP DASTSGAGAS GSGNFMFEAM DRRDNTGPGT GRQF

Best Arabidopsis Sequence Match ( AT2G47810.1 )
(BLAST)

001: MAGNYHSFQN PIPRYQNYNF GSSSSNHQHE HDGLVVVVED QQQEESMMVK EQDRLLPIAN VGRIMKNILP ANAKVSKEAK ETMQECVSEF ISFVTGEASD
101: KCHKEKRKTV NGDDICWAMA NLGFDDYAAQ LKKYLHRYRV LEGEKPNHHG KGGPKSSPDN

Arabidopsis Description

NFYB5NF-YB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VUG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.