CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011915_P001	Maize	nucleus	78.57	83.63
Zm00001d042196_P001	Maize	nucleus	79.12	80.45
Os01t0935200-01	Rice	nucleus	73.08	75.14
TraesCSU01G050900.1	Wheat	nucleus	70.88	70.49
TraesCSU01G203900.1	Wheat	nucleus	70.88	70.49
TraesCSU01G051000.1	Wheat	nucleus	70.88	70.49
HORVU3Hr1G098500.1	Barley	nucleus	70.88	70.49
KRH50875	Soybean	nucleus	46.7	70.25
TraesCS3D01G450100.1	Wheat	nucleus	70.88	70.11
TraesCS3A01G457100.1	Wheat	nucleus	70.88	67.89
KRH37126	Soybean	nucleus	43.41	67.52
KRH02238	Soybean	nucleus	45.6	67.48
VIT_05s0020g01350.t01	Wine grape	nucleus	50.0	65.94
GSMUA_Achr11P...	Banana	nucleus	58.79	64.46
GSMUA_Achr8P10020_001	Banana	nucleus	60.99	63.43
KRH31905	Soybean	cytosol, mitochondrion, nucleus	49.45	62.07
KRH71548	Soybean	nucleus	50.0	61.9
PGSC0003DMT400058414	Potato	nucleus	46.15	61.76
Solyc01g067130.2.1	Tomato	plastid	46.15	60.87
GSMUA_Achr5P17480_001	Banana	nucleus	53.85	60.87
KRH12126	Soybean	nucleus	46.15	58.33
VIT_07s0104g01640.t01	Wine grape	nucleus	51.1	53.14
Solyc06g009010.1.1	Tomato	nucleus	50.55	51.69
PGSC0003DMT400037958	Potato	nucleus	49.45	50.56
OQU78466	Sorghum	nucleus	35.71	47.45
OQU87808	Sorghum	nucleus	40.66	44.85
OQU88166	Sorghum	cytosol, mitochondrion, nucleus	34.07	42.47
KXG22176	Sorghum	nucleus	40.66	41.11
EER94693	Sorghum	nucleus	45.05	36.44
EER99684	Sorghum	nucleus	42.31	35.32
EES14637	Sorghum	nucleus	46.7	30.91
EES05602	Sorghum	nucleus	26.37	24.37
OQU76250	Sorghum	nucleus	34.07	23.75
KXG30848	Sorghum	nucleus	35.71	23.55
EER89161	Sorghum	cytosol, mitochondrion, nucleus	21.98	20.41
EES13767	Sorghum	nucleus	18.13	11.11

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.2	EntrezGene:8062279	UniProt:C5XH51	InterPro:CBFA_NFYB_domain	EnsemblPlants:EES04176
ProteinID:EES04176	ProteinID:EES04176.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072	PFAM:PF00808	PRINTS:PR00615	ScanProsite:PS00685
PANTHER:PTHR11064	PANTHER:PTHR11064:SF88	EnsemblPlantsGene:SORBI_3003G417800	SUPFAM:SSF47113	InterPro:Transcrpt_fac_NFYB/HAP3_CS	UniParc:UPI0001A856A7
RefSeq:XP_002459056.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:72352066..72357189

Molecular Weight (calculated)

19095.3 Da

IEP (calculated)

6.627

GRAVY (calculated)

-0.598

Length

182 amino acids

Sequence
(BLAST)

001: MADHLHGQAP DGDGRRAGLV GGGAGGGGDL EIKEQDRLLP IANVGRIMKQ ILPPNAKISK EAKETMQECV SEFISFVTGE ASDKCHKEKR KTVNGDDVCW
101: AFGALGFDDY VDPMRRYLHK YRELEGDRAA AAASSRGGGP GPGGDHHPGS TSSAGAGPSA AAGHFMFGAA MDRPDNTSSR PF

Best Arabidopsis Sequence Match ( AT2G47810.1 )
(BLAST)

001: MAGNYHSFQN PIPRYQNYNF GSSSSNHQHE HDGLVVVVED QQQEESMMVK EQDRLLPIAN VGRIMKNILP ANAKVSKEAK ETMQECVSEF ISFVTGEASD
101: KCHKEKRKTV NGDDICWAMA NLGFDDYAAQ LKKYLHRYRV LEGEKPNHHG KGGPKSSPDN

Arabidopsis Description

NFYB5NF-YB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VUG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.