Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019101_P001 | Maize | nucleus | 73.47 | 73.1 |
| OQU78466 | Sorghum | nucleus | 18.88 | 27.01 |
| OQU88166 | Sorghum | cytosol, mitochondrion, nucleus | 18.37 | 24.66 |
| OQU87808 | Sorghum | nucleus | 20.41 | 24.24 |
| KXG22176 | Sorghum | nucleus | 21.43 | 23.33 |
| EES04176 | Sorghum | nucleus | 20.41 | 21.98 |
| EES05602 | Sorghum | nucleus | 21.43 | 21.32 |
| EER99684 | Sorghum | nucleus | 23.47 | 21.1 |
| EER94693 | Sorghum | nucleus | 22.96 | 20.0 |
| KXG30848 | Sorghum | nucleus | 25.0 | 17.75 |
| EES14637 | Sorghum | nucleus | 22.45 | 16.0 |
| OQU76250 | Sorghum | nucleus | 20.41 | 15.33 |
| EES13767 | Sorghum | nucleus | 16.84 | 11.11 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | EntrezGene:8068424 | UniProt:C5Z3S0 | InterPro:CBFA_NFYB_domain | EnsemblPlants:EER89161 |
| ProteinID:EER89161 | ProteinID:EER89161.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 |
| PFAM:PF00808 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF82 | EnsemblPlantsGene:SORBI_3010G029500 | SUPFAM:SSF47113 | UniParc:UPI0001A89AB3 |
| RefSeq:XP_002437794.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:2388976..2390254
Molecular Weight (calculated)
21157.8 Da
IEP (calculated)
4.095
GRAVY (calculated)
-0.464
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNAQGNDHH DDPEGSKPLE EYTIPKATIT RIMRQVLPQD SRVTSAAKET VDQCIVEFST VLTQAAMQEC RRDHRRTITA DDLIAGIARL GFADYVQPMS
101: EFLRLYRENI NQQAVAPPAP PAPPAPGMEE ETAAPLPPPS PDLTLQIGLP SVPDVTELAP RTDVYALWPG GAPAAVGTSL EPTMPPPPAA DDDEDE
101: EFLRLYRENI NQQAVAPPAP PAPPAPGMEE ETAAPLPPPS PDLTLQIGLP SVPDVTELAP RTDVYALWPG GAPAAVGTSL EPTMPPPPAA DDDEDE
001: MADSDNDSGG HKDGGNASTR EQDRFLPIAN VSRIMKKALP ANAKISKDAK ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYVEP
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S
101: LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT TMGHQFSHHF S
Arabidopsis Description
NFYB3Nuclear transcription factor Y subunit B-3 [Source:UniProtKB/Swiss-Prot;Acc:O23310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.