Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P20700_001 | Banana | cytosol | 16.16 | 90.57 |
| Zm00001d032328_P005 | Maize | extracellular, plastid | 87.54 | 86.38 |
| Zm00001d050242_P002 | Maize | plastid | 82.83 | 82.83 |
| VIT_17s0000g04350.t01 | Wine grape | cytosol, mitochondrion, nucleus | 40.74 | 78.06 |
| KRH56716 | Soybean | cytosol, mitochondrion, nucleus | 40.07 | 75.8 |
| PGSC0003DMT400010436 | Potato | cytosol, mitochondrion, nucleus | 40.07 | 75.32 |
| KRH03842 | Soybean | cytosol, mitochondrion, nucleus | 40.4 | 75.0 |
| GSMUA_Achr1P20710_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 29.63 | 74.58 |
| KRH54787 | Soybean | cytosol, mitochondrion, nucleus | 39.06 | 74.36 |
| GSMUA_Achr9P00790_001 | Banana | cytosol, nucleus, peroxisome | 42.76 | 73.41 |
| Bra005976.1-P | Field mustard | cytosol, nucleus, plastid | 37.04 | 71.9 |
| AT5G23090.1 | Thale cress | cytosol, nucleus, plastid | 38.38 | 71.7 |
| PGSC0003DMT400059368 | Potato | cytosol | 37.37 | 71.61 |
| AT5G08190.1 | Thale cress | cytosol, nucleus, plastid | 39.06 | 71.17 |
| PGSC0003DMT400063256 | Potato | cytosol, nucleus, plastid | 38.05 | 71.07 |
| Bra035959.1-P | Field mustard | cytosol, nucleus, plastid | 39.73 | 70.24 |
| CDX87185 | Canola | cytosol, nucleus, plastid | 39.73 | 69.82 |
| CDY16839 | Canola | cytosol, nucleus, plastid | 39.73 | 69.82 |
| CDX69967 | Canola | cytosol, nucleus, plastid | 38.72 | 69.7 |
| CDY21520 | Canola | cytosol, nucleus, plastid | 38.72 | 69.28 |
| Bra009328.1-P | Field mustard | cytosol, nucleus, plastid | 38.72 | 69.28 |
| KRH62965 | Soybean | cytosol, nucleus | 24.92 | 69.16 |
| TraesCS3A01G450700.1 | Wheat | cytosol, mitochondrion, nucleus | 59.6 | 60.82 |
| TraesCS3B01G487800.1 | Wheat | cytosol, mitochondrion, nucleus | 60.27 | 60.47 |
| TraesCS3D01G443500.1 | Wheat | cytosol, mitochondrion, nucleus | 59.93 | 59.73 |
| Os08t0383700-02 | Rice | cytosol, extracellular | 48.48 | 58.06 |
| HORVU3Hr1G097680.4 | Barley | cytosol, mitochondrion, nucleus | 57.91 | 56.03 |
| Solyc12g038390.1.1 | Tomato | cytosol | 15.15 | 54.88 |
| CDY44761 | Canola | cytosol | 39.39 | 48.75 |
| CDY40760 | Canola | nucleus | 37.04 | 44.35 |
| Bra028668.1-P | Field mustard | nucleus | 25.59 | 39.58 |
| OQU87808 | Sorghum | nucleus | 13.8 | 24.85 |
| KXG22176 | Sorghum | nucleus | 13.8 | 22.78 |
| OQU78466 | Sorghum | nucleus | 10.1 | 21.9 |
| EER99684 | Sorghum | nucleus | 14.81 | 20.18 |
| OQU88166 | Sorghum | cytosol, mitochondrion, nucleus | 9.76 | 19.86 |
| EER94693 | Sorghum | nucleus | 13.8 | 18.22 |
| EES04176 | Sorghum | nucleus | 11.11 | 18.13 |
| EER89161 | Sorghum | cytosol, mitochondrion, nucleus | 11.11 | 16.84 |
| OQU76250 | Sorghum | nucleus | 14.14 | 16.09 |
| KXG30848 | Sorghum | nucleus | 14.48 | 15.58 |
| EES05602 | Sorghum | nucleus | 9.76 | 14.72 |
| EES14637 | Sorghum | nucleus | 13.13 | 14.18 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.3.5.7.1.2 | EntrezGene:8070009 | UniProt:C5YKK9 | InterPro:CBFA_NFYB_domain | EnsemblPlants:EES13767 |
| ProteinID:EES13767 | ProteinID:EES13767.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 |
| PFAM:PF00808 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF8 | EnsemblPlantsGene:SORBI_3007G117100 | SUPFAM:SSF47113 | unigene:Sbi.15776 |
| UniParc:UPI0001A87E99 | RefSeq:XP_002444272.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:50845778..50850007
Molecular Weight (calculated)
33438.4 Da
IEP (calculated)
5.147
GRAVY (calculated)
-0.921
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPMDIVGKS KEDVSLPKST MFKIIKEMLP PDVRVARDAQ DLLVECCVEF INLLSSESNE VCSREEKKTI APEHVLKALS DLGFREYIEE VYAAYEQHKL
101: DTLDSPKASK FTGIEMTEEE AVAEQQRMFA EARARMNNGA PKPKEPEQDP PQQPQAQPQL QLHTQTQQPM QSQLQLHSLT QHSLQPQLQL QPQSQPQQLP
201: QVQLHPQPQQ QTQVQMHPHP PQPPQVQVHP QPSQPQVQIH PQPQQPPQVQ LHSSAQQASQ PEPQVHLQSQ EPSQAQLQSQ LPGQLQTQAQ SGPGVDS
101: DTLDSPKASK FTGIEMTEEE AVAEQQRMFA EARARMNNGA PKPKEPEQDP PQQPQAQPQL QLHTQTQQPM QSQLQLHSLT QHSLQPQLQL QPQSQPQQLP
201: QVQLHPQPQQ QTQVQMHPHP PQPPQVQVHP QPSQPQVQIH PQPQQPPQVQ LHSSAQQASQ PEPQVHLQSQ EPSQAQLQSQ LPGQLQTQAQ SGPGVDS
001: MDPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLVSSESND VCNKEDKRTI APEHVLKALQ VLGFGEYIEE VYAAYEQHKY
101: ETMDTQRSVK WNPGAQMTEE EAAAEQQRMF AEARARMNGG VSVPQPEHPE TDQRSPQS
101: ETMDTQRSVK WNPGAQMTEE EAAAEQQRMF AEARARMNGG VSVPQPEHPE TDQRSPQS
Arabidopsis Description
DR1AT5G23090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHA9]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.