Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62965 | Soybean | cytosol, nucleus | 69.49 | 76.64 |
| Solyc12g038390.1.1 | Tomato | cytosol | 44.07 | 63.41 |
| VIT_17s0000g04350.t01 | Wine grape | cytosol, mitochondrion, nucleus | 77.12 | 58.71 |
| KRH56716 | Soybean | cytosol, mitochondrion, nucleus | 77.12 | 57.96 |
| KRH03842 | Soybean | cytosol, mitochondrion, nucleus | 77.97 | 57.5 |
| KRH54787 | Soybean | cytosol, mitochondrion, nucleus | 75.42 | 57.05 |
| PGSC0003DMT400059368 | Potato | cytosol | 73.73 | 56.13 |
| PGSC0003DMT400010436 | Potato | cytosol, mitochondrion, nucleus | 73.73 | 55.06 |
| PGSC0003DMT400063256 | Potato | cytosol, nucleus, plastid | 71.19 | 52.83 |
| Bra005976.1-P | Field mustard | cytosol, nucleus, plastid | 67.8 | 52.29 |
| GSMUA_Achr9P00790_001 | Banana | cytosol, nucleus, peroxisome | 76.27 | 52.02 |
| AT5G23090.1 | Thale cress | cytosol, nucleus, plastid | 69.49 | 51.57 |
| AT5G08190.1 | Thale cress | cytosol, nucleus, plastid | 71.19 | 51.53 |
| CDX69967 | Canola | cytosol, nucleus, plastid | 72.03 | 51.52 |
| Bra009328.1-P | Field mustard | cytosol, nucleus, plastid | 72.03 | 51.2 |
| CDY21520 | Canola | cytosol, nucleus, plastid | 71.19 | 50.6 |
| Bra035959.1-P | Field mustard | cytosol, nucleus, plastid | 69.49 | 48.81 |
| CDY16839 | Canola | cytosol, nucleus, plastid | 69.49 | 48.52 |
| CDX87185 | Canola | cytosol, nucleus, plastid | 69.49 | 48.52 |
| CDY44761 | Canola | cytosol | 71.19 | 35.0 |
| CDY40760 | Canola | nucleus | 69.49 | 33.06 |
| EES13767 | Sorghum | nucleus | 74.58 | 29.63 |
| Zm00001d032328_P005 | Maize | extracellular, plastid | 74.58 | 29.24 |
| Zm00001d050242_P002 | Maize | plastid | 72.88 | 28.96 |
| Bra028668.1-P | Field mustard | nucleus | 46.61 | 28.65 |
| TraesCS3A01G450700.1 | Wheat | cytosol, mitochondrion, nucleus | 69.49 | 28.18 |
| TraesCS3B01G487800.1 | Wheat | cytosol, mitochondrion, nucleus | 69.49 | 27.7 |
| TraesCS3D01G443500.1 | Wheat | cytosol, mitochondrion, nucleus | 69.49 | 27.52 |
| HORVU3Hr1G097680.4 | Barley | cytosol, mitochondrion, nucleus | 67.8 | 26.06 |
| Os08t0383700-02 | Rice | cytosol, extracellular | 45.76 | 21.77 |
| GSMUA_Achr11P... | Banana | nucleus | 17.8 | 16.03 |
| GSMUA_Achr5P28380_001 | Banana | nucleus | 17.8 | 15.11 |
| GSMUA_Achr2P13670_001 | Banana | nucleus | 21.19 | 14.97 |
| GSMUA_Achr8P28050_001 | Banana | nucleus | 18.64 | 14.01 |
| GSMUA_Achr8P21910_001 | Banana | cytosol | 12.71 | 12.71 |
| GSMUA_Achr6P02820_001 | Banana | nucleus | 17.8 | 12.43 |
| GSMUA_Achr8P17450_001 | Banana | nucleus | 20.34 | 12.37 |
| GSMUA_Achr11P... | Banana | nucleus | 16.95 | 12.05 |
| GSMUA_Achr4P27850_001 | Banana | nucleus | 19.49 | 11.92 |
| GSMUA_Achr5P17480_001 | Banana | nucleus | 16.1 | 11.8 |
| GSMUA_Achr3P04310_001 | Banana | nucleus | 21.19 | 11.79 |
| GSMUA_Achr8P10020_001 | Banana | nucleus | 16.95 | 11.43 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.8 | 10.45 |
| GSMUA_Achr1P20700_001 | Banana | cytosol | 4.24 | 9.43 |
| GSMUA_Achr6P35500_001 | Banana | nucleus | 11.02 | 9.15 |
| GSMUA_Achr9P09260_001 | Banana | nucleus | 11.86 | 8.0 |
| GSMUA_Achr8P05300_001 | Banana | nucleus | 10.17 | 7.84 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P20710_001 | EnsemblPlants:GSMUA_Achr1T20710_001 | EnsemblPlantsGene:GSMUA_Achr1G20710_001 | Gene3D:1.10.20.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 |
| InterPro:CBFA_NFYB_domain | InterPro:Histone-fold | InterPro:IPR009072 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF8 | PFAM:PF00808 |
| SUPFAM:SSF47113 | UniParc:UPI0002965BCD | UniProt:M0S1M9 | MapMan:15.3.5.7.1.2 | : | : |
Description
Protein Dr1 homolog [Source:GMGC_GENE;Acc:GSMUA_Achr1G20710_001]
Coordinates
chr1:+:15591463..15595034
Molecular Weight (calculated)
13234.5 Da
IEP (calculated)
4.187
GRAVY (calculated)
-0.503
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFLAYLSAA SLEFINLLSS ESNEVCNRED KKTIAPEHVL KALEVLGFGE YIEEVYAAYE QHKLDTLDSP KGGKFSGIEM TEEEALAEQQ RMFAEARARM
101: NNGVSIQKQP EADNNLES
101: NNGVSIQKQP EADNNLES
001: MDPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLVSSESND VCNKEDKRTI APEHVLKALQ VLGFGEYIEE VYAAYEQHKY
101: ETMDTQRSVK WNPGAQMTEE EAAAEQQRMF AEARARMNGG VSVPQPEHPE TDQRSPQS
101: ETMDTQRSVK WNPGAQMTEE EAAAEQQRMF AEARARMNGG VSVPQPEHPE TDQRSPQS
Arabidopsis Description
DR1AT5G23090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHA9]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.