Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0004g03490.t01 | Wine grape | nucleus | 57.73 | 84.21 |
| GSMUA_Achr11P... | Banana | nucleus | 52.58 | 77.86 |
| KRG95922 | Soybean | nucleus | 64.95 | 77.3 |
| PGSC0003DMT400004366 | Potato | nucleus | 55.67 | 77.14 |
| GSMUA_Achr5P28380_001 | Banana | nucleus | 54.12 | 75.54 |
| KRH32395 | Soybean | nucleus | 61.86 | 75.0 |
| KXG22176 | Sorghum | nucleus | 69.07 | 74.44 |
| Solyc04g009520.2.1 | Tomato | nucleus | 32.99 | 74.42 |
| Zm00001d038397_P005 | Maize | nucleus | 67.53 | 73.6 |
| VIT_08s0040g03260.t01 | Wine grape | nucleus | 60.82 | 73.29 |
| CDX74880 | Canola | nucleus | 53.61 | 73.24 |
| KRH67637 | Soybean | nucleus | 64.43 | 73.1 |
| Bra005074.1-P | Field mustard | nucleus | 53.09 | 72.54 |
| PGSC0003DMT400082465 | Potato | nucleus | 48.97 | 71.97 |
| Os05t0463800-02 | Rice | nucleus | 68.04 | 71.35 |
| Zm00001d010574_P001 | Maize | nucleus | 68.56 | 71.12 |
| VIT_13s0019g03600.t01 | Wine grape | nucleus | 64.43 | 71.02 |
| TraesCS1D01G287500.1 | Wheat | nucleus | 65.46 | 69.78 |
| TraesCS1B01G297900.2 | Wheat | nucleus | 64.95 | 69.23 |
| TraesCS7A01G486400.1 | Wheat | cytosol | 37.63 | 68.87 |
| TraesCS1A01G288500.3 | Wheat | nucleus | 64.43 | 68.68 |
| Solyc09g007290.2.1 | Tomato | nucleus | 45.36 | 68.22 |
| AT2G37060.2 | Thale cress | nucleus | 60.31 | 67.63 |
| TraesCS7B01G501400.1 | Wheat | cytoskeleton, cytosol, nucleus | 39.69 | 67.54 |
| CDY18462 | Canola | nucleus | 60.31 | 66.86 |
| Bra006991.1-P | Field mustard | nucleus | 61.34 | 66.85 |
| Solyc04g049910.2.1 | Tomato | nucleus | 56.7 | 66.67 |
| KRH34567 | Soybean | nucleus | 59.79 | 66.67 |
| KRG92229 | Soybean | nucleus | 59.28 | 66.47 |
| AT3G53340.5 | Thale cress | nucleus | 58.76 | 64.77 |
| AT2G38880.8 | Thale cress | nucleus | 53.61 | 63.41 |
| Bra017209.1-P | Field mustard | nucleus | 62.37 | 63.35 |
| CDY18460 | Canola | nucleus | 62.37 | 62.37 |
| CDY72254 | Canola | nucleus | 59.79 | 62.37 |
| Bra023095.1-P | Field mustard | nucleus | 62.89 | 61.0 |
| CDY07691 | Canola | nucleus | 52.06 | 60.84 |
| TraesCS5B01G454900.1 | Wheat | cytoskeleton, cytosol, nucleus | 38.14 | 60.66 |
| GSMUA_Achr2P13670_001 | Banana | nucleus | 48.97 | 56.89 |
| CDY14422 | Canola | nucleus | 47.42 | 56.1 |
| GSMUA_Achr8P28050_001 | Banana | nucleus | 44.33 | 54.78 |
| CDX79714 | Canola | nucleus | 61.86 | 54.05 |
| CDX91501 | Canola | nucleus | 57.73 | 52.83 |
| CDX73560 | Canola | nucleus | 61.34 | 51.97 |
| GSMUA_Achr6P02820_001 | Banana | nucleus | 44.85 | 51.48 |
| GSMUA_Achr4P27850_001 | Banana | nucleus | 50.0 | 50.26 |
| HORVU1Hr1G071620.5 | Barley | nucleus, plastid | 64.43 | 49.6 |
| GSMUA_AchrUn_... | Banana | nucleus | 49.48 | 47.76 |
| GSMUA_Achr11P... | Banana | nucleus | 40.72 | 47.59 |
| CDX78169 | Canola | nucleus | 61.34 | 46.3 |
| GSMUA_Achr6P35500_001 | Banana | nucleus | 33.51 | 45.77 |
| CDY46752 | Canola | nucleus | 62.89 | 45.69 |
| GSMUA_Achr5P17480_001 | Banana | nucleus | 37.63 | 45.34 |
| GSMUA_Achr8P10020_001 | Banana | nucleus | 40.21 | 44.57 |
| GSMUA_Achr8P21910_001 | Banana | cytosol | 26.8 | 44.07 |
| GSMUA_Achr8P05300_001 | Banana | nucleus | 34.02 | 43.14 |
| GSMUA_Achr9P09260_001 | Banana | nucleus | 35.05 | 38.86 |
| GSMUA_Achr3P04310_001 | Banana | nucleus | 38.14 | 34.91 |
| GSMUA_Achr1P20700_001 | Banana | cytosol | 7.73 | 28.3 |
| GSMUA_Achr9P00790_001 | Banana | cytosol, nucleus, peroxisome | 18.56 | 20.81 |
| GSMUA_Achr1P20710_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 12.37 | 20.34 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | InterPro:CBFA_NFYB_domain | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | GO:GO:0046982 | EnsemblPlantsGene:GSMUA_Achr8G17450_001 | EnsemblPlants:GSMUA_Achr8P17450_001 | EnsemblPlants:GSMUA_Achr8T17450_001 | InterPro:Histone-fold |
| InterPro:IPR009072 | UniProt:M0TR98 | PFAM:PF00808 | PRINTS:PR00615 | ScanProsite:PS00685 | PANTHER:PTHR11064 |
| PANTHER:PTHR11064:SF85 | SUPFAM:SSF47113 | InterPro:Transcrpt_fac_NFYB/HAP3_CS | UniParc:UPI0002955DD9 | SEG:seg | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_19.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr8G17450_001]
Coordinates
chr8:-:17185825..17188212
Molecular Weight (calculated)
21348.3 Da
IEP (calculated)
7.043
GRAVY (calculated)
-0.438
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAPASPGG GGCGHESGGD QSPRSSVREQ DRFLPIANIS RIMKKALPAN AKIAKDAKET VQECVSEFIS FITSEASDKC QREKRKTING DDLLWAMATL
101: GFEDYIEPLK LYLHKYREGD NKVSAKGGDS SVKQDTASSH GGTQPGPISQ GMGHQGTFTQ GMSYLQPQVL YFFFLFLVRT SDDFNVLFRF MLLH
101: GFEDYIEPLK LYLHKYREGD NKVSAKGGDS SVKQDTASSH GGTQPGPISQ GMGHQGTFTQ GMSYLQPQVL YFFFLFLVRT SDDFNVLFRF MLLH
001: MAESQAKSPG GCGSHESGGD QSPRSLHVRE QDRFLPIANI SRIMKRGLPA NGKIAKDAKE IVQECVSEFI SFVTSEASDK CQREKRKTIN GDDLLWAMAT
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
Arabidopsis Description
NFYB8Nuclear transcription factor Y subunit B-8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.