Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72254 | Canola | nucleus | 90.29 | 84.95 |
| AT2G37060.2 | Thale cress | nucleus | 83.43 | 84.39 |
| Bra017209.1-P | Field mustard | nucleus | 92.0 | 84.29 |
| CDY18460 | Canola | nucleus | 92.57 | 83.51 |
| PGSC0003DMT400004366 | Potato | nucleus | 58.86 | 73.57 |
| Solyc09g007290.2.1 | Tomato | nucleus | 52.0 | 70.54 |
| VIT_08s0040g03260.t01 | Wine grape | nucleus | 64.57 | 70.19 |
| CDX79714 | Canola | nucleus | 87.43 | 68.92 |
| CDX74880 | Canola | nucleus | 53.14 | 65.49 |
| Zm00001d038397_P005 | Maize | nucleus | 64.0 | 62.92 |
| TraesCS7A01G486400.1 | Wheat | cytosol | 37.71 | 62.26 |
| KXG22176 | Sorghum | nucleus | 63.43 | 61.67 |
| TraesCS7B01G501400.1 | Wheat | cytoskeleton, cytosol, nucleus | 40.0 | 61.4 |
| GSMUA_Achr8P17450_001 | Banana | nucleus | 66.86 | 60.31 |
| CDY21888 | Canola | nucleus | 53.71 | 59.87 |
| CDX73560 | Canola | nucleus | 78.29 | 59.83 |
| CDY20167 | Canola | nucleus | 53.71 | 59.49 |
| Os05t0463800-02 | Rice | nucleus | 62.29 | 58.92 |
| TraesCS5B01G454900.1 | Wheat | cytoskeleton, cytosol, nucleus | 40.57 | 58.2 |
| CDY46752 | Canola | nucleus | 88.57 | 58.05 |
| Zm00001d010574_P001 | Maize | nucleus | 61.14 | 57.22 |
| CDY07691 | Canola | nucleus | 53.71 | 56.63 |
| TraesCS1D01G287500.1 | Wheat | nucleus | 58.86 | 56.59 |
| TraesCS1A01G288500.3 | Wheat | nucleus | 58.86 | 56.59 |
| TraesCS1B01G297900.2 | Wheat | nucleus | 58.29 | 56.04 |
| CDY30123 | Canola | nucleus | 52.57 | 55.76 |
| CDY14422 | Canola | nucleus | 50.29 | 53.66 |
| CDX78169 | Canola | nucleus | 77.71 | 52.92 |
| CDY41061 | Canola | nucleus | 54.29 | 51.63 |
| CDY25955 | Canola | nucleus | 54.86 | 51.34 |
| CDX75855 | Canola | nucleus | 54.29 | 51.08 |
| CDY40552 | Canola | nucleus | 53.14 | 50.27 |
| CDX82424 | Canola | nucleus | 54.29 | 50.26 |
| CDY28916 | Canola | nucleus | 53.14 | 50.0 |
| CDY53021 | Canola | nucleus | 40.57 | 45.81 |
| CDX91501 | Canola | nucleus | 55.43 | 45.75 |
| CDX83320 | Canola | nucleus | 40.57 | 45.51 |
| CDX95014 | Canola | nucleus | 34.29 | 45.45 |
| CDX77785 | Canola | cytosol | 32.0 | 41.79 |
| HORVU1Hr1G071620.5 | Barley | nucleus, plastid | 58.86 | 40.87 |
| CDX80136 | Canola | nucleus | 40.0 | 40.7 |
| CDY37212 | Canola | nucleus | 48.0 | 40.38 |
| CDX93117 | Canola | nucleus | 48.0 | 40.19 |
| CDX89608 | Canola | nucleus | 48.0 | 40.19 |
| CDX81449 | Canola | nucleus | 46.29 | 38.94 |
| CDY25952 | Canola | nucleus | 43.43 | 36.72 |
| CDY41063 | Canola | nucleus | 43.43 | 36.36 |
| CDY17715 | Canola | nucleus | 42.86 | 32.47 |
| CDY00411 | Canola | nucleus | 37.71 | 28.7 |
| CDY01304 | Canola | nucleus | 37.71 | 28.57 |
| CDY16839 | Canola | cytosol, nucleus, plastid | 23.43 | 24.26 |
| CDX87185 | Canola | cytosol, nucleus, plastid | 23.43 | 24.26 |
| CDX69967 | Canola | cytosol, nucleus, plastid | 22.86 | 24.24 |
| CDY21520 | Canola | cytosol, nucleus, plastid | 22.86 | 24.1 |
| CDY68650 | Canola | nucleus | 37.14 | 21.67 |
| CDY38832 | Canola | nucleus | 28.0 | 21.4 |
| CDY30639 | Canola | nucleus | 38.29 | 19.59 |
| CDY44761 | Canola | cytosol | 22.29 | 16.25 |
| CDY40760 | Canola | nucleus | 21.71 | 15.32 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | GO:A0A078G0E2 | UniProt:A0A078G0E2 | InterPro:CBFA_NFYB_domain | EnsemblPlants:CDY18462 |
| ProteinID:CDY18462 | ProteinID:CDY18462.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| GO:GO:0046982 | EnsemblPlantsGene:GSBRNA2T00005464001 | InterPro:Histone-fold | InterPro:IPR009072 | PFAM:PF00808 | PRINTS:PR00615 |
| ScanProsite:PS00685 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF85 | SUPFAM:SSF47113 | InterPro:Transcrpt_fac_NFYB/HAP3_CS | UniParc:UPI0004EE0809 |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g21250DBnaA04g21250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0E2]
Coordinates
chrLK032085:-:652368..653952
Molecular Weight (calculated)
19277.4 Da
IEP (calculated)
6.946
GRAVY (calculated)
-0.818
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESQTKSPG DHVSGGDQSP RSSSHVREQD RFLPIANISR IMKRGLPANG KIAKDAKEIL QECVSEFISF VTSEASDKCQ REKRKTINGD DLLWAMATLG
101: FEEYIEPLKL YLTRYREVYG DSKGSARGGD ANANRDGQSS QNGQFSQFAH QGSYPQGPYG NSQAQHMMVP MPGAD
101: FEEYIEPLKL YLTRYREVYG DSKGSARGGD ANANRDGQSS QNGQFSQFAH QGSYPQGPYG NSQAQHMMVP MPGAD
001: MAESQAKSPG GCGSHESGGD QSPRSLHVRE QDRFLPIANI SRIMKRGLPA NGKIAKDAKE IVQECVSEFI SFVTSEASDK CQREKRKTIN GDDLLWAMAT
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
Arabidopsis Description
NFYB8Nuclear transcription factor Y subunit B-8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.