Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18462 | Canola | nucleus | 84.39 | 83.43 |
| AT3G53340.5 | Thale cress | nucleus | 83.24 | 81.82 |
| Bra023095.1-P | Field mustard | nucleus | 89.6 | 77.5 |
| PGSC0003DMT400004366 | Potato | nucleus | 60.12 | 74.29 |
| Bra017209.1-P | Field mustard | nucleus | 79.77 | 72.25 |
| VIT_08s0040g03260.t01 | Wine grape | nucleus | 66.47 | 71.43 |
| CDY18460 | Canola | nucleus | 79.77 | 71.13 |
| CDY72254 | Canola | nucleus | 76.3 | 70.97 |
| CDX79714 | Canola | nucleus | 87.86 | 68.47 |
| Solyc09g007290.2.1 | Tomato | nucleus | 50.87 | 68.22 |
| KXG22176 | Sorghum | nucleus | 67.63 | 65.0 |
| Zm00001d038397_P005 | Maize | nucleus | 66.47 | 64.61 |
| Os05t0463800-02 | Rice | nucleus | 68.21 | 63.78 |
| TraesCS7A01G486400.1 | Wheat | cytosol | 38.15 | 62.26 |
| TraesCS7B01G501400.1 | Wheat | cytoskeleton, cytosol, nucleus | 39.88 | 60.53 |
| GSMUA_Achr8P17450_001 | Banana | nucleus | 67.63 | 60.31 |
| Zm00001d010574_P001 | Maize | nucleus | 64.74 | 59.89 |
| AT2G38880.8 | Thale cress | nucleus | 56.07 | 59.15 |
| TraesCS1A01G288500.3 | Wheat | nucleus | 61.27 | 58.24 |
| TraesCS1D01G287500.1 | Wheat | nucleus | 61.27 | 58.24 |
| CDY46752 | Canola | nucleus | 89.6 | 58.05 |
| AT4G14540.1 | Thale cress | nucleus | 53.76 | 57.76 |
| TraesCS1B01G297900.2 | Wheat | nucleus | 60.69 | 57.69 |
| TraesCS5B01G454900.1 | Wheat | cytoskeleton, cytosol, nucleus | 40.46 | 57.38 |
| AT5G47640.1 | Thale cress | nucleus | 54.34 | 49.47 |
| AT2G47810.1 | Thale cress | nucleus | 42.77 | 46.25 |
| HORVU1Hr1G071620.5 | Barley | nucleus, plastid | 61.27 | 42.06 |
| AT1G09030.1 | Thale cress | nucleus | 33.53 | 41.73 |
| AT2G13570.1 | Thale cress | nucleus | 50.87 | 40.93 |
| AT5G47670.3 | Thale cress | nucleus | 40.46 | 29.91 |
| AT1G21970.1 | Thale cress | nucleus | 39.88 | 28.99 |
| AT5G23090.1 | Thale cress | cytosol, nucleus, plastid | 22.54 | 24.53 |
| AT5G08190.1 | Thale cress | cytosol, nucleus, plastid | 21.97 | 23.31 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.2 | EntrezGene:818282 | EntrezGene:824502 | ProteinID:AAD18153.1 | ProteinID:AEC09345.1 |
| ProteinID:AEC09346.1 | ProteinID:AEC09347.1 | ArrayExpress:AT2G37060 | EnsemblPlantsGene:AT2G37060 | RefSeq:AT2G37060 | TAIR:AT2G37060 |
| RefSeq:AT2G37060-TAIR-G | EnsemblPlants:AT2G37060.2 | TAIR:AT2G37060.2 | EMBL:AY070477 | EMBL:AY091673 | Unigene:At.28391 |
| InterPro:CBFA_NFYB_domain | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | Symbol:NF-YB8 | RefSeq:NP_001031500.1 |
| RefSeq:NP_001327562.1 | RefSeq:NP_190902.2 | RefSeq:NP_850277.2 | RefSeq:NP_973617.1 | ProteinID:OAP06865.1 | PFAM:PF00808 |
| PO:PO:0000293 | PO:PO:0001017 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00615 | ScanProsite:PS00685 |
| PANTHER:PTHR11064 | PANTHER:PTHR11064:SF85 | UniProt:Q8VYK4 | SUPFAM:SSF47113 | InterPro:Transcrpt_fac_NFYB/HAP3_CS | UniParc:UPI00000A97CC |
Description
NFYB8Nuclear transcription factor Y subunit B-8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYK4]
Coordinates
chr2:+:15575996..15577916
Molecular Weight (calculated)
18999.4 Da
IEP (calculated)
6.934
GRAVY (calculated)
-0.821
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESQAKSPG GCGSHESGGD QSPRSLHVRE QDRFLPIANI SRIMKRGLPA NGKIAKDAKE IVQECVSEFI SFVTSEASDK CQREKRKTIN GDDLLWAMAT
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
101: LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.